Saccharomyces paradoxus: SPAR_M02100
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Entry
SPAR_M02100 CDS
T08193
Name
(RefSeq) Utp15
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
spao
Saccharomyces paradoxus
Pathway
spao03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SPAR_M02100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spao03009
]
SPAR_M02100
Ribosome biogenesis [BR:
spao03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SPAR_M02100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP15_C
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WDR55
WD40_WDHD1_1st
Beta-prop_NOL10_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_WDR19_1st
DSE1_N
Beta-prop_EIPR1
ANAPC4_WD40
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_ACSF4
Beta-prop_CAF1B_HIR1
Beta-prop_WDR41
CFAP251_N
DNAI3_WD
MIOS_WD40
DUF7332
Motif
Other DBs
NCBI-GeneID:
54632787
NCBI-ProteinID:
XP_033768397
UniProt:
A0A8B8UXB6
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Position
XIII:<438478..>440019
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AA seq
513 aa
AA seq
DB search
MSTARPRIITSKAPLLPQQTTPEQRYWRQYTSAQLVKEHNSVTHISFNPQHPHDFAVTSS
TRVQIFSSRTRQVIKTFSRFKDVVYSASFRSDGKLLCAGDATGLVSVYDSYNPRTILLSI
NASTHPTHVTKFHTQDNKVLATASDDRVTRLWDISNAYEPQLELTGATDYVRTLSFIPAA
PHLVATGSYDGLIRLYDTRSSGSTPIYSLNHDQPIENVIAVSPTQIVSCGGNNFKVWDLT
SNKKLYERGNFNKAVTCLDYVENFDSPMQSALIASSLDGHVKVFDPLDNFQVRFGWKFSG
PVLSCAVSPSTAQGNRHLIAGLSSGLLAIRTKKKEKRTSDKESAPVSSNKNVKSNNFQRM
MRGSEYQGDQEHIIHNDKVRSQRRMRAFERNINQFKWSEALDNAFVPGMAKELTLTVLQE
LRKRGKIRVALYGRDESTLEPLLNWCLKGIEDVRSASIVADWVAVVLELYGNTLESSPVL
QELMIDLKAKVRHEIHKSKEAQRIEGMLQLLTS
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtccactgccaggcctagaataattacttcaaaggctccgttattgcctcaacagact
actccggagcagcgttactggcgtcaatacacttccgcacaactggttaaagaacataat
agcgtcactcacatatcgttcaatcctcaacaccctcatgattttgcagtaacctcctcg
accagggttcaaatattctcttcaagaacaaggcaggtaatcaaaaccttctcaagattt
aaagatgttgtctattctgcatcttttagaagtgatggtaagttgctttgtgccggtgat
gctaccggtttagtgtccgtatacgatagttacaatccaagaactatccttttatctata
aacgcatccacacatcctacacatgttacgaagtttcatacccaagataataaagttcta
gctacggcaagtgatgatagagtgacaagactttgggatatatccaacgcatatgagcca
caattagaacttacaggagctactgattatgtccgtacattatcatttattccagctgcc
ccacatttggttgcaacaggttcatatgatggtttgattagattatatgatacaagatcc
agcggatccactccaatttattctctgaatcatgatcaacctatcgagaatgttattgca
gtatccccaactcaaatcgtttcttgcggtggcaataactttaaagtttgggacttgacc
agtaataagaaattatacgaacgtggtaatttcaacaaggctgtcacatgcttggactat
gttgagaattttgattctccaatgcaatcagcattgattgcttcttcgttagatgggcat
gtaaaagtttttgatcctttagacaatttccaagtcaggtttggttggaaattttcgggt
cccgtactaagttgtgcagtctctcctagtactgcacaagggaataggcatttaatagct
ggtttatcatcaggtctactagccatcagaaccaaaaagaaggagaaacgtacttccgat
aaagaaagtgcaccagtaagctcaaataagaatgtaaagagtaataacttccaaagaatg
atgcgaggatcagaataccaaggtgatcaagagcatataatccacaatgataaggtaaga
tctcaacgtcgtatgcgtgcattcgaaaggaacataaatcagtttaaatggagtgaagcg
ctagacaatgcttttgtaccgggtatggccaaagagttgacactcactgtccttcaagaa
ctacgcaaacgtgggaaaattcgtgtagcattgtatggtagagacgaatctacattagag
ccgctactgaattggtgcttaaaaggtatcgaagatgtgaggtcagcatctatagtcgcg
gattgggtcgctgtagttttagaattatatgggaatacattagaaagctctccagttctt
caagaattgatgatagatttgaaagctaaagttagacacgaaattcataagtccaaagaa
gctcaaagaattgaaggtatgctccaacttttgacgagttaa
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