Saccharomyces paradoxus: SPAR_M02220
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Entry
SPAR_M02220 CDS
T08193
Name
(RefSeq) Yku80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
spao
Saccharomyces paradoxus
Pathway
spao03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SPAR_M02220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spao03400
]
SPAR_M02220
DNA repair and recombination proteins [BR:
spao03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
SPAR_M02220
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Gene cluster
GFIT
Motif
Pfam:
Ku_N
Ku
RNase_3_N
Motif
Other DBs
NCBI-GeneID:
54632799
NCBI-ProteinID:
XP_033768409
UniProt:
A0A8B8UXB1
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Position
XIII:complement(462554..464434)
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AA seq
626 aa
AA seq
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MSSESTTFIVDVSPSMMKNDNVSKSMAYLEYTLLNKSKKSRKTDWISCYLANCPVSENSQ
EIPNVFQIQSFLAPVTTTATIGFIKHLKQYCDQHSHDSPVEGLQSMIQCLLVASLDIKQQ
FQARKILKQIVVFTDNLDELDITDEEIDVLTEELKTRIILVDCGENTRDERKKSNWLKLV
EAIPNSRVYNINELLVEITSPATSVVKPIRVFSGELRFGADILSTQTSNPSGSVQDENCL
CIKVEAFPATKAVSGLNRKTVVEVEDSQKKERYVGVKSIIEYEIHNEGNKKNVNEDDKSE
SSYIPVTISKDSVTKAYRYGADYVVLPSILVDQTVYESFPGLDLRGFLDREALPRYFLTS
ESSFITADTRLGCLSDSMAFSALVDVMLENRKIAVARYVSKKDSEVNMCALCPVLIGHSN
INSEKKFVKSLTLCRLPFAEDERVTDFPKLLNRTTTSGAPLKKETDGHQIDDLMEQFVDS
MDTDELPEIPLGNYYQPIGEVTTDTTLPLPSLNKEQEANKRDPLRIPTVFIYRQQQVLLE
WIHQLMINDSKEFEIPELPDSLKNKISPYMHKRFDSAKLVELLQIKKVDKLKLASELRTE
LEREKIPDLETLLRRGEQHSKGPKHE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcgagtcaacaactttcatcgtggatgtgtcaccatcaatgatgaaaaatgat
aatgtttccaaatctatggcgtatctagagtacactttattaaacaaatctaaaaaaagt
aggaaaacagattggataagctgttatctcgctaattgtcctgtatctgaaaattcccag
gaaataccaaatgtgttccaaatacagtcctttttggctcctgttaccacaacggccacc
attgggtttataaaacacctgaaacaatattgtgatcagcacagtcatgatagtccagtt
gaaggcttgcaatcaatgattcaatgcctgttggttgcctcattagacattaaacaacaa
tttcaagcaagaaaaattctaaaacaaattgttgtgtttacagataatctagatgaactg
gatattactgatgaagaaatagatgtgctaacggaagaattaaaaacaagaatcattttg
gttgattgcggcgaaaatacgagagatgaaagaaaaaaatcgaactggttgaagttagtc
gaagcgataccgaattcaagagtctacaatataaatgaacttcttgttgaaatcacttcc
ccagcaacatctgtcgttaagccaataagagtattctcaggcgagcttagatttggagca
gatatattatcaacgcaaacgtcaaatcctagcggtagcgtgcaagatgaaaattgctta
tgcatcaaagtagaggcatttcctgctacgaaagcagtttcaggcttaaataggaaaacc
gttgttgaggttgaagattcccagaagaaagaaaggtatgtaggagtcaaatctataatc
gaatatgaaattcacaacgaaggaaataagaaaaatgtcaatgaagacgacaagtccgag
tcctcttatattcctgtgaccatctccaaggactctgtaacgaaggcataccgttatggt
gcagattacgttgtgctaccgtccattctagtcgaccaaactgtatatgaatcctttccc
gggttggatttaagaggatttttggatagagaagctcttccaaggtactttttgacgtcg
gaatcttccttcattaccgcagatacaagacttggttgtctatctgactccatggccttc
agtgccctagtggacgttatgctagagaataggaaaattgccgttgcaagatacgtgagc
aagaaagacagtgaagtgaatatgtgcgcattgtgtcccgttctaattgggcacagtaac
attaattccgagaagaaatttgttaagagccttaccttgtgtagattaccatttgcggaa
gacgaaagggtaaccgatttcccaaaacttttgaatagaacaactacatccggagcgccg
ctaaaaaaggaaacagacgggcatcaaatcgatgaccttatggaacaatttgtagattca
atggatacagatgagctaccagagattccattaggcaactactatcaacccataggtgaa
gtaacgacagacaccactctcccacttccctctttaaataaagaacaagaggcaaacaaa
agggatcctcttaggatacctacggtttttatctacaggcaacaacaggtactattggaa
tggattcaccagttgatgattaacgattccaaggaatttgaaatcccagagcttccagat
tcattgaagaacaaaataagtccttatatgcacaagagatttgatagcgcaaaactggtt
gaacttcttcaaatcaagaaagtagacaaattaaaactcgcctctgaactaagaactgag
ctcgagagagaaaaaatcccagacttagaaaccctattaaggcgcggcgaacaacacagt
aaggggccgaaacatgagtag
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