Saccharomyces paradoxus: SPAR_M02440
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Entry
SPAR_M02440 CDS
T08193
Name
(RefSeq) Ecm16
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
spao
Saccharomyces paradoxus
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spao03009
]
SPAR_M02440
Enzymes [BR:
spao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SPAR_M02440
Ribosome biogenesis [BR:
spao03009
]
Eukaryotic type
90S particles
Helicases
SPAR_M02440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HA2_C
Helicase_C
OB_NTP_bind
HA2_N
DEAD
AAA_22
nSTAND3
AAA_19
ATPase
Sigma70_ner
PhoH
TsaE
Motif
Other DBs
NCBI-GeneID:
54632821
NCBI-ProteinID:
XP_033768431
UniProt:
A0A8B8UXJ3
LinkDB
All DBs
Position
XIII:508169..511999
Genome browser
AA seq
1276 aa
AA seq
DB search
MGTYRKRFNEKARSGHMAKLKELKRIRNKQFTRQDENDEKAEKSESASCESGMTDSNVNA
EILEPLTEEEKKMKKRKLQELFTPKESKVSRLKKKRLDKFIDHQLKREERKTIIGKLQDY
KIDTSLLTSSKRLGEGRQTKKEEFKEALSLERQGRGNEQTKEILYEEYEPKVWDEDGRAE
SHGDEDEDDFEATFGAMVKPTDKDERKPSGFIDHRPAKFGGFGLGFGFNNIKVINKTSKT
PKKKYNWRQRVEMEELKKHGKEDEMDFDTTSEEEEEEEEEEEEEEEEEEEEEEEDKIEPS
GNTLEEVAGANSETDLKESDQKDVANEFKDWANQEIKKMEGRDQELVTPTLNIDYKPIIR
EEDLDDGLNETYIPINENSTRKAFYVEVNRSDEIQKTRIRLPVFGEEHRIMEAIHHNDVV
IICGETGSGKTTQVPQFLYEAGFGAEDSPDYPGMVGITQPRRVAAVSMAGRVANELGDHG
HKVGYQIRFDSTTKDDTKVKFMTDGVLLREMMHDFKLTKYSSIIIDEAHERNINTDILIG
MLSRCVRLRAKQHEENPIEHKKLKLIIMSATLRVSDFSENKALFPIAPPILQVDARQFPV
SIHFNRRTAFNYTEEAFRKTCKIHRKLPPGAILVFLTGQQEITHMVKRLRKEFPFKKNSK
YNKELETPISKMGISSKTTDLEVEDIDFSVQVIDQDKFKSAIKYEDDEVNNENDVDEEEE
EEEGFEEVLTEGQTANDPLYVLPLYSLLPTKEQMRVFQQPPQGSRLCIVATNVAETSLTI
PGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASANQRSGRAGRTGPGHCYRLYSSAVF
EHDFEQFSRPEILRMPVESIVLQMKSMAIHNIINFPFPTPPDRVALSKAVQLLQYLGALD
NKEMITEDGKKMSLFPLSPRFSKMLLVSDEKACLPYIVAIVSALSVGDPFINEFELGINE
ISRKPNADEQEDDKDKDLDESTSGMDPELKKELRSKFYKSRAQFGKLDKFGDVFRLLSVV
SAMDYVPREQKEIFMKKNFLRGKLMEEIVKLRKQLMYIIKSNTSKENIAVVIRSEDLKSD
IPSVIQIKLLKQMICAGFVDHVAIRADVLFPDDAKITNRTSMINIPYIPVLATRTPNIED
CFVYIHPTSILNNLGEMPPKYMLYYSLHVGGSNKTRMNTLCDIASTPLANIARKGLLLTY
SKPLTGQGLKTVNLSPTERYCYVVPRFGSKVDNDLKISWDLNPIAVHQRKQKGQWTVIKF
ITRKGFQAITGEENKK
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgggtacttatagaaaaaggtttaatgagaaggccagatccggccatatggctaaatta
aaggaactgaaaagaattaggaataagcagttcaccagacaggatgaaaacgatgaaaag
gcggaaaagtcagagtcagcttcgtgtgaaagtggtatgacggattcaaatgttaatgca
gaaattcttgaaccccttactgaagaagaaaagaagatgaagaaaagaaaactacaagag
ttatttacaccaaaggaatcaaaagtttccaggttaaagaaaaaaaggctggataagttt
attgaccaccaattgaaaagagaggaaagaaagacaattataggtaaactccaagattat
aagatagatacgagtttgctgacaagctctaagaggctaggtgagggcaggcagactaaa
aaggaagaattcaaagaagcactgagtttggaacgtcaaggaagaggaaatgaacaaaca
aaggaaatattatacgaagaatatgaaccaaaagtttgggatgaggacggtagagcggaa
agccatggggatgaggacgaagatgatttcgaggctacctttggtgctatggtgaaaccg
acagacaaggatgagaggaaaccttctggttttattgatcacaggccagcaaaatttggt
ggctttggtcttggcttcggattcaacaatataaaagtcataaataaaacaagcaaaact
ccgaagaagaaatataattggagacaacgtgtagaaatggaagaactgaagaagcatggg
aaagaagacgaaatggattttgacacgacatcagaagaagaggaagaggaagaggaagag
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagacaaaattgagcctagt
ggaaacacactcgaagaagtcgcaggtgcaaatagtgaaactgacttaaaagaatctgac
cagaaagacgtcgctaacgaattcaaggactgggccaatcaggaaattaaaaaaatggaa
ggtagagaccaagagctagttactcctactttgaacatcgattataaaccgatcattaga
gaggaagatttagatgatggtctcaacgaaacttatatcccaataaatgagaattccacg
cgtaaagccttctatgttgaagttaacagatcagatgaaattcaaaaaacaagaattcga
ctaccagtgtttggtgaggaacacagaattatggaggctattcatcataacgatgtggta
attatttgtggtgaaaccgggtcaggtaagactacacaggtcccacaatttttatatgaa
gctgggtttggtgccgaagactcccccgattacccaggaatggtgggcataacacaacca
agaagagtggctgctgtgtctatggctgggcgtgtagcaaacgaattgggtgaccatggc
cataaagtgggataccaaattaggtttgactctactacgaaagatgacacaaaggtcaag
tttatgacagatggtgtcttattacgagaaatgatgcacgattttaagctgactaaatat
tcctctattatcatagatgaagcccacgaaagaaacatcaatactgacattttgattggt
atgctgagccgttgcgttcgtttaagagccaaacagcatgaggagaatccaatcgaacac
aagaagcttaaacttattattatgtcagctacattaagggtgtcagatttcagtgaaaac
aaagcattgttccccattgcaccccctatcttacaagttgatgcaagacagtttcctgtc
tctattcactttaaccgtagaactgcattcaattatacagaagaggctttcagaaagact
tgtaaaattcaccggaaattacctcctggtgctatattggtgtttttaaccggtcagcaa
gaaatcacccatatggtaaaaaggctaagaaaggaatttccattcaagaaaaattccaag
tacaataaagaattggaaactcccatttctaaaatgggtattagctcaaagacaacggat
ttggaggttgaggatatagattttagtgtccaagttatcgatcaagataagttcaagagc
gcgataaaatatgaagacgatgaagttaacaacgaaaacgatgttgacgaagaagaggag
gaagaagaaggatttgaggaagtcctgactgaagggcaaacagctaatgatcccttatat
gtgcttccgctttattctctattaccaaccaaggaacaaatgagagtctttcagcagcct
ccccaaggttccaggttgtgcattgttgcaacaaatgttgcagaaacatcgctaactata
cccggggttagatatgttgttgattccgggaggtccaaggaacgtaaatataatgaatca
aatggcgtacagagtttcgaagttggctgggtaagtaaagctagtgccaatcaaagaagc
ggaagagctggtcgtactggaccgggccattgttaccgcttatattcttctgctgtcttt
gagcacgatttcgaacaattctctagacctgaaatcttaagaatgccggtggagagcatt
gtgttacaaatgaagagtatggccattcataatattatcaattttccatttccaacccct
ccagatagagtggctctttccaaggcagtgcaattactgcaatatttaggggctcttgat
aataaagagatgattactgaagatggtaaaaaaatgagccttttcccactttcacctaga
ttttccaaaatgttacttgtttccgatgaaaaggcctgccttccttatatcgtggcaatc
gttagtgctctttcagtgggagatccttttatcaatgaatttgagttaggaataaacgaa
atttccagaaaaccaaacgctgatgaacaagaagatgataaggacaaagatcttgatgag
tcaacatcaggtatggaccctgaacttaaaaaggaattgcgcagtaaattttataaaagc
agggcacagtttggtaagttagacaagttcggtgatgtatttcgcttattaagcgttgta
agtgcaatggattatgttccaagggaacaaaaagaaatatttatgaagaaaaatttttta
agaggcaaactaatggaagaaattgtcaaattgagaaagcagttaatgtatattatcaag
tccaacacatcaaaagaaaacattgccgtagtaattaggagcgaagatttaaaaagtgac
attccaagcgtaatacaaataaaactattaaaacaaatgatttgcgccggttttgtcgac
catgtcgccattagagcagatgttttatttccagatgacgccaagataaccaacagaact
tccatgatcaatattccttatattcccgttttggctacgagaacaccaaatatcgaggac
tgctttgtctacatccatccaacttcaatcttaaataacttgggggaaatgccacccaaa
tatatgctgtattattcgttgcacgtgggtggaagtaacaaaacaagaatgaatacttta
tgtgatatcgcaagcactcccctagcaaacatagcaaggaagggtcttcttttgacatac
agtaaacctttgaccggtcaaggcttgaagaccgttaatttatcgcctacggagcggtat
tgttatgtggttcctagattcggatctaaagttgacaatgatctcaagattagctgggat
ttaaatcctatagcagtgcatcaaaggaagcaaaaaggccaatggacagtcattaagttt
attaccaggaagggtttccaggccattaccggcgaagaaaataaaaaatga
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