Saccharomyces paradoxus: SPAR_M02450
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Entry
SPAR_M02450 CDS
T08193
Name
(RefSeq) Pom152
KO
K18725
nucleoporin POM152
Organism
spao
Saccharomyces paradoxus
Pathway
spao03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SPAR_M02450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spao03019
]
SPAR_M02450
Messenger RNA biogenesis [BR:
spao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SPAR_M02450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_Pom152
Ig-like_POM152
Ig-like_Pom152_9
Ig-like_Pom152_1
TMD_POM152
Motif
Other DBs
NCBI-GeneID:
54632822
NCBI-ProteinID:
XP_033768432
UniProt:
A0A8B8UXE8
LinkDB
All DBs
Position
XIII:512307..516320
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AA seq
1337 aa
AA seq
DB search
MEHRYNVFNDTPRGNHWMGSSASGSPRPSHSSRPNVNTTRRFQYNDDEPGEEIRPLRSRK
FKNTENELSDERSRISERDSRDRHISGDKKVDIYSLPLISTDVLEISKQRTFAVIFFLII
QCYKIYDLVILKSGLPLSGLLFKNYRFNFISKYFIMDSLFLYVLPSFNIPRLTFKPWMVY
LQILGMILLNIFISSDHEFVLISLVLTTWRKIYTRELSVTGSAINHHRIVDSSAHFKGAL
TIKILPENTAMFNPLHESYCLPMDTNLFKINSIDVPIRINSTEEIDFIELEYRDLYTNAV
ESRSLSKKDFRIINNPKSLLNKDQSVLKSHSNDFEEGSTIRYLAVTLQDIGFYQIKKIVD
SKKLNLKIHQSHLVVPYCPIASITGTGNNDRCIGDSDNVSLEIQGVPPMKLAYSKIVNGQ
TFSYADSSLQPEYFESPLQSSKSKQSFTQEELNDMKWGRNQPVNINLDSSITQDGKYAYK
IDKIIDGLGNVVDFTSLPEDLKKRYDLSYDFNVHGIPRAALEERFDLKSPTKRSIAIVFE
EIKNWISDIPYVISLTYTDAQDKSKKKMNITTDSLTKVLQADLPGLYSLEYIESKFCPGA
IVGKSNVLVTMPVAPTMEVKSFPILDQCVGQVGLNFELSFTGAPPYYYNTKIYKLESGER
KLYDAKRYTSEGTRNHFSYSPPKEGNYEIVFDTVSNKLFTEPIRLEPVKDYTFKTSMRVK
PSASLKLHHDLELCLGDHSSVPVALKGQGPFTLTYDIIETFSSKRKTFEIKDIKTNEYVI
KTPVFSTGGDYIISLVSIKDSTGCIVGLSQPDAKIQVRRDIPSVAFNFFEPVKEAKIKHG
SVTEIPLKLSGEGPFTVKFKHMDYDGKILKESENKFQNSYKPALKVSKEGLYQLIDIRDS
SCQGKVIDQNSVYKVSFLEKPNFAIQDNHHITRLTKNSFSKEEVCQGMEGTVDLALFGSP
PFILEYDLMAPNGHIFTKKIQVATKYASLKLPNQIPGEYITTIKAIFDGNYGESDVHFRE
HQSELVIKQTVHPIPDVAFADGGKTLRACAANVDQISFLEPINLKFLQGESPFSITFSVY
HESTSRTDQYTIDNIDSENFSFEKLYEGMKLGNHAISIDSVADANGCVNNLISGPRKQIL
VSITDAPKIHILDPSTEYCVGDYVAYQLNGVAPFMIKYEFNGIPLKSKERSSQFVRLASE
PGVISITSLQDSSSQCIVDFTKPGLKSEFNDLSLNIHPIPSVTVSQGNYVTEDIREGDQA
EVIFSFEGTPPFSLTYVRTEETDGKHGKKRSQVVETHKVTDIYSHEYKVITSLQGTYEAI
EITDAYCFAKNDLFFNN
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atggagcacagatataacgtgtttaatgatactccgcgagggaaccattggatgggcagt
tctgcgtcaggatcaccacgtccatcccatagtagtcgtcctaatgtaaatacaacacga
cgtttccaatataatgacgatgaacccggtgaggaaattcggcctttacgttcgaggaaa
ttcaaaaacactgaaaatgaattgagcgatgagagatctaggatatctgaacgcgacagc
agagaccgccacattagtggtgataagaaggtagatatttattcactgcccctaatatca
acagatgttttagaaatttcgaaacaaaggacatttgcggtgatattttttcttataatt
caatgttataaaatatatgatctggtaatacttaaatccggattaccactttcgggttta
ctgtttaagaattatcggtttaatttcatatccaagtatttcattatggattcattattc
ctttatgttttgccatcctttaacattcctagactgactttcaagccatggatggtgtat
cttcagatcttaggtatgatactattgaacatatttatatcaagcgatcacgagttcgtt
ttaatttcattagttttgaccacatggagaaaaatttatacgagggaactaagcgtaaca
ggctctgccatcaatcatcatcgtattgttgattcctccgctcattttaagggcgctcta
acaataaagatcttgcctgaaaatacggcaatgttcaaccctcttcatgaatcatattgt
ttacccatggataccaatcttttcaaaattaactctattgatgtacccatcagaataaac
tcaactgaagagattgattttattgaattagaatatagagatctctacacaaatgcggta
gaatcacggtctttgagcaagaaagacttcagaatcataaataaccccaaatccttacta
aataaagaccagtcagttctaaaatctcattcgaacgattttgaagaaggtagtacaatt
cgttatttggcggtaacccttcaagatattggtttttatcaaatcaaaaaaattgttgat
tctaaaaaactaaatttaaaaattcatcagtcgcacttggttgttccctactgtccaatt
gcatcgattactgggactggaaacaatgatagatgtattggtgattcggataatgtttct
cttgaaattcagggtgtgcctccaatgaagttagcatactctaagatcgttaatggtcaa
acattttcatatgcagactccagcctgcaaccagaatattttgagtcgcccttacaatca
agtaaatccaaacagagttttacccaagaagaattaaacgatatgaaatggggtagaaac
caacctgttaatattaatttagattcttcaattacccaggacggcaaatatgcatataaa
atcgacaaaataattgacggcctgggaaatgtcgtggattttacatctctccctgaagat
ttaaaaaaacgttatgatttgtcttatgattttaatgttcatgggattccacgtgcagcg
ctagaggaaagattcgatctcaaatcacccacgaaaaggtcgattgccatcgtgttcgaa
gaaatcaaaaactggatttcagatattccgtatgttattagcctaacctatactgatgca
caagacaaatcgaaaaagaaaatgaatatcactacagattctttgactaaggtccttcaa
gctgatcttccggggttgtatagtttagaatacattgaatctaagttttgtccgggtgcg
attgttggtaaatcaaacgtcctagttactatgccggttgcacctactatggaagttaaa
tcctttccaatattggaccagtgcgtgggacaagttggcctaaatttcgagttatctttt
actggcgctccaccatactattataacaccaaaatttataagcttgaaagtggtgaaaga
aagctatatgatgcaaagagatacacctcggaaggtactagaaatcacttcagttatagt
ccacctaaagaaggtaattatgaaattgtatttgatacggtttccaataaactattcacg
gaaccaatcagattggaacctgtaaaagattatactttcaagacatcaatgagagtaaaa
ccaagcgcatcactaaaattacaccatgatctggaactctgtttgggtgaccacagtagt
gtccctgtagctttaaaaggtcagggccctttcacgttgacatatgatatcatagaaaca
ttttcaagcaagaggaaaacctttgaaatcaaagatattaaaactaacgaatatgttatt
aaaacaccggtcttctctactggtggcgattatattatatctttggtttctattaaggat
tccactggctgtatagttggactcagtcaaccggatgctaaaatacaggtgagaagagat
atcccatccgtcgcattcaattttttcgagcctgttaaagaagccaaaattaagcatggt
tctgttaccgaaatcccgctcaaattaagtggagaggggccatttaccgttaagtttaag
cacatggattatgatggaaaaattttgaaagaatctgaaaacaaatttcagaatagttat
aagccggctttgaaggtaagtaaagaaggactttaccaattgatcgatattcgtgactca
agctgtcaaggtaaggtaattgaccagaacagtgtgtataaggtatctttcttggagaag
ccaaactttgccattcaagataaccatcacataacaagattgacgaagaattcattttcc
aaagaggaagtctgtcaagggatggaaggtactgtcgatttggctctatttggctctccg
cccttcatactagaatacgatttgatggcacccaacggtcatatttttacaaaaaagatt
caagttgcaaccaaatatgcctcactgaaactacctaaccaaattcctggagagtacata
actactattaaggccatctttgatggcaattatggtgagagtgacgtacattttagagag
catcagtcagaactcgtaatcaaacagaccgtacatcccattccagacgttgcatttgcc
gatggtggtaagaccctgcgtgcatgcgctgccaatgtagatcaaatctcatttttggaa
ccaataaatttgaaatttttgcaaggggaaagcccattttcaatcacctttagcgtttac
catgagagtactagtagaacagatcaatataccattgataatattgactcagaaaatttt
tcgttcgaaaagttgtatgaaggcatgaagttaggtaaccatgccataagtattgattct
gtcgctgacgcaaatggttgcgtcaataatctcatatccgggccacgtaagcaaattctc
gtgtcaattaccgatgcaccaaagatacatatattagatccttctacggagtactgtgtg
ggggactatgttgcgtatcaactaaacggtgtggcacctttcatgatcaagtatgaattc
aatggtattccactaaaatctaaggaacgcagctcccaatttgtaagattagcctctgaa
ccgggtgttatatctatcacttctttacaagattcatcctcacaatgcattgtcgacttt
acgaagcccggtttgaagagtgaatttaatgatttatccttaaatatacatccaattcct
tccgtaactgtttctcaaggaaattacgtcactgaggatattcgcgaaggtgaccaggct
gaagtgatcttttcatttgagggtacgccgccgttctcattaacttatgtaaggacggaa
gaaacagatggaaaacacggcaaaaagaggtcacaggttgttgaaacgcacaaagtcaca
gatatatattcacatgagtacaaggtaattacaagtttgcaaggtacctacgaggcgatt
gaaatcacagatgcttattgttttgccaaaaatgatctctttttcaataactag
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