Saccharomyces paradoxus: SPAR_M03050
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Entry
SPAR_M03050 CDS
T08193
Name
(RefSeq) Sgs1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
spao
Saccharomyces paradoxus
Pathway
spao03440
Homologous recombination
spao03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SPAR_M03050
03460 Fanconi anemia pathway
SPAR_M03050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spao03032
]
SPAR_M03050
03400 DNA repair and recombination proteins [BR:
spao03400
]
SPAR_M03050
Enzymes [BR:
spao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SPAR_M03050
DNA replication proteins [BR:
spao03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
SPAR_M03050
DNA repair and recombination proteins [BR:
spao03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
SPAR_M03050
Bloom's syndrome complex (BTR)
SPAR_M03050
FA (Fanconi anemia) pathway
SPAR_M03050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_Sgs1
RQC
DEAD
Helicase_C
RecQ_Zn_bind
Rhodanese
Motif
Other DBs
NCBI-GeneID:
54632882
NCBI-ProteinID:
XP_033768492
UniProt:
A0A8B8UXK4
LinkDB
All DBs
Position
XIII:complement(632968..637311)
Genome browser
AA seq
1447 aa
AA seq
DB search
MVTKPSHNLRREHKWLKETATLQEDRDFVFQAIQKHITNKRPKTNSPPTTPSRDEYGAGA
TNLLTSVPASASTNTATKQHEVLQTLSNDTEWLSYPATSNQYTDVPMVDIPASTSVVSNP
RTPSGSKAHNFNTYPSHMGSSLVENDSSRNLDCRNNIKDLTDNSGTNKQFENNMKVEVIR
LQSSLIAALKEQSKLLMQKCSIIESTSLSEDAKRLQLSRDIRPQLSNMSIRIDSLEKEIV
KSKKDGTSKGHIKGRSQIPSQDDNIISSILPSPLENNTSSRNSNLTNTAATTVTKALVIT
ATKQTISNNTNKNSNNNSNDDDLIQVLDDEDDVDYDPPITLKEGAPQSPAFPPLHMSSEE
QDELIRSRSMRSREPVNYRIPDRDDPFDYVMGKSLKDDYPDVEREEDELTMEAEEDAHSS
YMTTRDEEKEESDLLNQSDFDFVVNDGLDPTQDTDYHDNLDVSANIQEKSQEDDTRSTIT
LSQNKNVQVILSSPTAQSASSNCQKLTGVEHIDLLEDDLEKDAILDDSMSFSFGHQHVPM
SHSDLELIDSEKENGGYEEDNNNNDVEYLSDSDLERFDEERENRTQVADIQELDNDLKII
TERKLTGDNNHRSPSWSPIIKMEKSSVCQKGEEDDFDDDFSLSDIVSKSNLPSKTNAPTY
PWSDEVLYRLHEVFKLPGFRPNQQEAVNATLQGKDVFVLMPTGGGKSLCYQLPAVVKSGK
THGTTIVISPLISLMQDQVEHLLNKNIKASMFSSRGTAEQRRQTFNLFINGLLDLVYISP
EMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDIPMI
ALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKKTKNTIFEICDAVKSRFKN
QTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQADEIQVICATVAF
GMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGKYSYCITYFSFRDIRTMQTMIQKDK
NLDRENKEKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDSKSCHKNCDNCRNSANVIN
EERDVTEPAKKIVKLVESIQNERVTIIYCQDIFKGSRSSKIVQANHDTLEEHGLGKSMQK
SEIERIFFHLITIRVLQEYSIMNNSGFASSYVKVGPNAKKLLTGKMEIKMQFTISAPNSR
PSTSSSFQPNEDNTPVIAQKSTTIGGSVAANPPRFISAKEHLRSYTYGGSTMGASHPISL
KNTNDLRSTQELNNLRMTYERLRELSLNLGNRMVPPVGNFMPDCILKKMAAILPMNDLAF
ATLGTVEDKYRRRFKYFKATIADLSKKRSSADHEKYDTILNEESANGASASDSGIVQSTG
TRSKFFDANPNEARENEQIINQIRQSQLPKNATSSKSGTRAICKPVKKSTNGRRGFRNYR
GHYRGRK
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atggtgacgaagccctcacataacttaagaagggagcacaaatggttgaaggaaacggcg
actttgcaggaagacagagattttgtcttccaggctatccaaaagcacattacgaacaag
aggcctaagacaaattcgccacctactaccccatccagagatgagtatggagcaggagca
acaaatttattaaccagtgttcctgcctctgcatctactaatactgctacgaagcaacat
gaggttttgcaaacattatcgaacgacacggaatggctctcctaccctgccacatcaaac
caatatactgacgtacccatggttgatataccagccagcacaagtgttgtatcgaaccca
aggacccccagtggctcaaaagcccacaatttcaacacatatccctcgcatatgggtagt
tctcttgtggaaaatgacagtagtagaaatctagactgcagaaataatattaaagattta
actgataattcaggtacaaacaaacagttcgagaataatatgaaagtagaggtaatccga
cttcagagctccctgattgcggccttaaaagaacaatcgaaattattaatgcaaaaatgt
agcatcatcgaatctacatcattgtcagaggacgccaaaaggctgcaattaagtagagat
atacggccccagttatcaaatatgtccatccgaatagattccctggaaaaggagatcgta
aaatctaagaaagatggaacgtcaaaaggccatattaaaggacgcagtcaaattccttca
caagatgataatattatatcaagcattctgcctagtcccttggaaaacaatacatcctcc
aggaattcaaatctgacaaatacggctgcaaccactgtcactaaggctttggtcatcact
gcaaccaaacaaactatttctaataacacgaataagaatagcaataacaatagtaacgac
gatgatttgattcaagttctagatgatgaggatgatgtagattatgatccgcccataaca
ctgaaagagggggctccacaatctcctgcattcccacctctccacatgtcctcagaagaa
caagatgaacttataagaagcaggagtatgcgttcgagagaaccagttaactatagaata
cctgacagggatgatccttttgactatgtaatgggtaaatctttgaaagacgattatccg
gatgttgaacgagaagaggatgaattaacaatggaggcagaagaggatgcccattctagc
tatatgactactagagatgaagaaaaagaggaaagcgatttgttaaatcaaagcgatttt
gattttgtagtaaacgatggtcttgacccaactcaagacactgattatcatgacaatctg
gatgttagtgctaatattcaagaaaaatcccaagaagacgataccagatccacaattact
ttatcacaaaataaaaatgttcaggttattttatcatctccaacagcacaaagcgcttca
tcaaattgccaaaagctaacaggtgtggagcatattgacttgttggaagatgacctggaa
aaggatgcaattctggatgatagtatgagtttctcttttggtcatcaacatgtgcccatg
tctcattctgatttagagttgatagacagcgaaaaagaaaatggtggttatgaagaagat
aataacaataacgatgtcgagtacctatcagatagcgatttagaaagatttgacgaagaa
agagagaatagaacccaagtagcagatatccaggaactagacaatgacctgaaaataata
acagaaagaaagcttaccggtgataataatcatcgatcaccatcttggtctcccataata
aaaatggagaaatccagtgtttgtcaaaagggcgaggaagacgattttgatgacgatttt
tcattaagcgatatagtgagtaaatccaatttaccctccaaaacgaacgctccaacctac
ccttggtctgatgaagttttataccgtttacacgaagtattcaaactgcctggtttcaga
cccaaccaacaagaggctgtcaatgcgactttgcaaggtaaagatgtttttgtgcttatg
ccgacagggggtggtaaatctctttgctatcaacttcctgcagtggttaaatcgggtaag
acacatggtactactattgtcatctctccgttaatttccctgatgcaagatcaagtggaa
catttattgaataaaaatattaaagcgagcatgttcagctcgagggggaccgctgagcaa
agacgacaaactttcaatttatttatcaatggattattggatttagtttacatatctcct
gaaatgatcagtgcttcagaacaatgcaaaagagctatcagtagattgtatgcggatggt
aagttggcccgtattgttgtagatgaagcgcattgtgtttctaactggggccacgatttc
aggcctgattataaagaattaaaatttttcaaaagagaataccctgatatcccaatgatt
gctctaactgcaactgcaagtgaacaagtcagaatggatatcattcacaatctagagctg
aaggagcctgtttttctaaagcaaagttttaatagaacaaatttgtattatgaagtgaac
aagaagaccaaaaataccatttttgagatctgtgatgccgttaaatctaggttcaaaaac
caaactggtataatatattgccactctaaaaaatcttgcgaacaaacgtcagctcaaatg
caaagaaatggcatcaaatgtgcatattaccatgcaggtatggagcctgatgaaagatta
agtgtacaaaaggcatggcaagcggatgagatacaagttatttgtgctaccgtcgctttc
ggtatgggtattgataaacctgatgtcagatttgtttaccattttactgttccccgaaca
ttagaagggtattatcaagaaaccggccgtgccggaagagatgggaagtattcatattgt
attacctacttttcatttagagacattagaaccatgcagacaatgattcagaaggataag
aacttagacagagaaaataaggagaaacatctgaataaattacagcaagtgatggcgtat
tgtgataacgttacagattgcagaagaaagttggttttatcttatttcaatgaggatttt
gactccaaatcgtgtcacaagaactgtgacaattgtagaaacagcgccaacgtgatcaat
gaggaaagggatgttacagaacctgccaagaagatcgtcaaattagtggaaagtatccaa
aatgaaagggtcacaataatttattgccaagacatttttaaaggttcgaggagctcaaaa
attgttcaggcaaaccatgacacattagaggaacatggtctcggtaaatccatgcaaaaa
tctgaaatcgagagaatttttttccatttaattacgatccgagttttacaagagtattca
ataatgaacaatagcggctttgcttcaagttacgtaaaagttggccccaacgctaaaaaa
ttgctcaccggaaaaatggagataaagatgcaatttacaatatcggcaccaaactcccgt
ccctcgacatcttctagctttcaaccaaatgaagataatacaccagttattgcacagaaa
tcaacgactattggaggaagtgtggctgctaatccaccgcgctttataagtgcgaaggaa
cacctaagatcgtatacatatggtggttcgaccatgggtgcctctcatccgatctctctg
aagaacacgaacgatttacgttcaacacaagaacttaataacctgcgaatgacatacgaa
cgtttgagggaattatctttaaatttaggaaatagaatggttcctccagttgggaacttt
atgcctgactgtatattaaaaaaaatggcggcaatattaccgatgaacgacttagctttt
gcaactttaggtaccgtggaggataaatatcgccgaaggttcaagtacttcaaagccacg
attgcggatcttagcaagaaaagatccagcgcggaccatgaaaaatacgacacaatattg
aatgaagaatctgcgaacggagcgtctgcttccgacagtgggattgttcaaagtactgga
acaagatctaagttttttgacgccaatccaaacgaagctagggaaaatgagcaaataatc
aaccaaatcagacaaagtcagttacccaagaatgccacaagcagtaaatcaggtacgagg
gcgatctgcaagccggtcaagaagtctaccaatggtagacgaggttttagaaactaccga
ggtcactacagaggaaggaagtaa
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integrated database retrieval system
