Saccharomyces paradoxus: SPAR_M03450
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Entry
SPAR_M03450 CDS
T08193
Name
(RefSeq) Rrp5
KO
K14792
rRNA biogenesis protein RRP5
Organism
spao
Saccharomyces paradoxus
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spao03009
]
SPAR_M03450
Ribosome biogenesis [BR:
spao03009
]
Eukaryotic type
90S particles
Other 90S particles
SPAR_M03450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
HAT_PRP39_N
OB_RRP5_4th
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
Suf
HAT_Syf1_CNRKL1_C
TPR_14
TPR_19
FAM171A1-2-B_N
Ribosomal_S4e
TPR_21
Motif
Other DBs
NCBI-GeneID:
54632922
NCBI-ProteinID:
XP_033768532
UniProt:
A0A8B8UXP5
LinkDB
All DBs
Position
XIII:complement(<718111..>723288)
Genome browser
AA seq
1725 aa
AA seq
DB search
MVAPTKRKRDDEFPLSREDSTTQPSTSSLVRNTEEVSFPRGGASALTPLELKQVANEAAS
DVLFGNENVKASEPTSRPLKKKKTTKKATSKDSETSSANSDEAKVGLVEHVNFKTLKNGS
SLLGQISGITKQDLCITFTDGISGYVNLTHISEEFTSILEDLDEDMDGDVDAADEKKSKV
DDAEYESSDDEDEKLDKSNELPNLRRYFHVGQWLRCSVIKNTSLESSTKKSKKKRIELTI
EPSFVNTYADEDLVKSTSIQCAVKSIEDHGAILDVGLSGFTGFIAKKDFGNFENLLPGAV
FLGNITKKSDRSIVVNTDFSDKKNKISQISSVDAIIPGQIVDILCESITKNGIVGKVFGL
VSGVVNVSHLRTFSEEDLKHKFAIGSSIRCRIIACLENKSGEKVLILSNLPHILRLEDAL
KSTEGLDAFPIGYTFESCSIKGRDSEYLYLALDDDRLGKVHSSRVGEIENSENLSSRVLG
YSPVDDIYQLSTDPKYLKLKYLRTNDIPIGELIPSCEITSVSSSGIELKIFNGQFKASVP
PLHISDTRLVYPERKFKIGSKVKGRVISVNSRGNVHVTLKKSLVNIEDNELPLVSTYENA
KNIKEKNEKTLATVQVFKANGCIISFFGGLSGFLPNSEISEVFVKRPEEHLRLGQTVVVK
LLDVDADRRRIIATCKVSNEQATQQKDTIENIIPGRTIITVDVIEKTKDSVIVEIPDVGL
RGVIYAGHISDARIEQNRAQLKKLRIGTELTGLVIDKDTRTHVFNMTLKSSLIKDAKKET
LPLTYDDVKDKKKDIPMHAYIKSISDKGLFVAFNGKFIGLVLPSYAVDSRDIDISKTFYI
NQSVTVYLLRIDDQNQKFLLSLKAPKVKEEKKKVESNIEDAIDPSIKSWDDLSIGSIVRA
KIKSVKKNQLNVILASNLHGRVDIAEVFDTYEEIKDKKQPLSNYKKDDIIEVKIIGNHDV
KSHKFLPITHRISKASILELSIKPSELKSKEVHTKTLEEINIGEDLTGFVNNSSGNHLWL
TISPVLKARISLLDLADDNVNLSETIESVFPLGSALQVKVASIDREHGFVNAIGKAHVDI
NMTTIKVGDEFPGRVLKIAEKYVLLDLGNKVTGISFITDALNDFSLSLKEGFGDKINNVI
PTTVLAVDAENKKIELSLRSAAAKTRSIKSHEDLKQGDIVDGIIKSVNDKGIFVYLSRKV
EAFVPVSKLSDSYLKEWKKFYKPMQYVLGKVVTCDEDSRISLTLRESEINGDLKVLKAYS
DIKAGDVFDGTVKNVTDFGVFVKLDNTVNVTGLAHITEIADKKPEDLSALFGVGDRVKAI
VLKTNLEKKQISLSLKASHFSKEAELPSTTTGQPEKEDEDEDEVMADADFNDSDNESDIG
DQNAVVTDKKTEISSDGLSLSAGFDWTASILDQAQEEESEEDQEDFTENRKHKHKRRKEK
VVQDKTIDINTRAPESVADFERLLIGNPNSSVVWMNYMAFQLQLSEIEKARELAERALKT
INFREEAEKLNIWIAMLNLENTFGTEETLEDVFSRACQYMDSYIIHTKLLGIYEISEKFD
KAAELFKATAKKFGSEKVSIWVSWGDFLISHNEEQEARTILGNALKALAKRNHIEVVRKF
AQLEFAKGDPERGRSLFEGLVADAPKRIDLWNVYVDQEVKAKDKKKVEDLFERIITKKIT
RKQAKFFFNKWLQFEESQGDEKTIEYVKAKATEYVASHDVPKTDE
NT seq
5178 nt
NT seq
+upstream
nt +downstream
nt
atggtagctcccaccaagagaaagagagatgacgagtttccactttcgagggaagattcc
acaacgcagccctctacctcatcgttggtaaggaacactgaggaagtctcttttccaaga
ggtggtgcttctgctttaactcctttagaactaaaacaagttgctaacgaagctgcaagt
gatgtgttatttggtaatgaaaatgtcaaagcatctgaaccaacaagtagacccttgaaa
aagaagaaaacaaccaagaaagctacttctaaagattctgaaacatcgtcggccaactct
gatgaagcaaaagttggactagttgaacatgtcaacttcaaaaccttgaagaatggctct
tctttactaggtcaaatttctggtatcactaagcaagatttatgtataacattcaccgat
ggcatctctggttatgtgaacctaacacatatctcggaggaattcacctcgatcttggaa
gatctcgatgaagatatggacggtgatgttgatgctgctgatgagaaaaaatctaaagtc
gatgacgcagaatacgaatcatccgacgatgaagatgaaaaattggacaaatctaatgaa
ttacctaatttaagaaggtactttcacgttggccaatggttaagatgctctgtcatcaag
aatacctctttagaatcatcaactaagaaatccaaaaagaagagaatagaattaaccatc
gaaccttcattcgtcaacacatacgcagatgaagatttggttaagtccacgtctattcaa
tgtgcggtcaaatccatcgaggatcatggtgctatcctggatgtgggtctctcaggcttt
acagggtttattgctaagaaggatttcggtaattttgaaaacttattgccaggtgctgtt
ttcttgggcaatatcaccaaaaaatctgataggtcgattgttgtaaatacagacttttca
gacaaaaaaaacaaaattagtcaaatttcttcagttgacgccattattcctggacaaatt
gtcgacatattatgtgaatctatcactaagaatggtattgtcggtaaagtttttgggtta
gtatctggtgttgttaacgtatcacatttaagaacattttccgaggaagatttaaagcat
aaatttgccatcggttctagtattagatgtcgaattattgcttgtttagaaaacaaaagt
ggtgaaaaggtcttgattttgtcaaaccttccacacatcttgagactagaagacgctttg
aaatctaccgagggtcttgatgcgttccctatcggctacacatttgaatcatgtagcatt
aaaggccgtgattcggaatatttatacttggcattggatgatgacagattaggtaaagta
cattcttccagagttggtgaaattgaaaattcagagaatttaagttccagggtccttggt
tacagccctgttgatgatatttatcaattatcaactgatccgaagtacctaaaattaaag
tatctaaggacgaatgatattccaattggggaattgatacccagttgtgaaattacttcc
gtctctagctcgggtattgaattaaagatatttaatgggcaatttaaagcttctgttcca
ccgctacatatctcagatactagactagtttatccagaaagaaaattcaagataggttct
aaagttaaaggtagagttatatcagtcaattcaagaggtaatgtgcatgtcactttaaaa
aaatcattagtcaacatagaagacaacgaattaccattagtttccacttatgaaaacgca
aaaaatatcaaagaaaaaaacgaaaaaactttagcaactgttcaagttttcaaggcaaac
ggttgtatcatttccttttttggtggtttatcgggattcttgcccaattctgaaatttca
gaagtcttcgtgaagaggccagaggaacatctaagacttggtcaaacggtagtagtaaaa
cttcttgacgttgatgctgacaggaggagaattattgccacatgcaaagtttcaaatgag
caagctactcaacaaaaagatactattgaaaatattattccaggtagaacaattattact
gtcgacgttatcgaaaagaccaaagattctgttatcgttgaaatcccagatgttggctta
cgtggtgtcatctacgctggccatatttctgatgccagaattgaacaaaatagggctcaa
ttgaaaaagctcagaattggtaccgaactgactggtttagtaatcgacaaagatacaaga
acccacgtcttcaatatgacccttaaaagttctttaattaaagacgctaaaaaagaaact
cttccattaacgtatgatgacgttaaggataaaaaaaaagatattccaatgcacgcttac
attaaatccatttctgataaaggtctttttgttgcctttaacggtaagttcatcgggttg
gttttaccaagttacgctgttgatagtagggatattgatattagtaagactttttatatt
aaccagtctgttactgtctatttattgagaatagacgatcaaaaccagaaattcttatta
tctttgaaagctccaaaggtcaaagaagagaaaaagaaagttgaatctaatatcgaagat
gctattgatccatcgatcaaaagctgggatgacttgtctattggtagtatcgttagagcg
aaaatcaagagtgtcaagaagaaccaattgaatgtcattttagcttcaaacttgcacggt
agagttgacattgctgaagtgtttgacacgtatgaagaaattaaggataagaaacaacct
ttgagtaattacaagaaagacgacattattgaagttaaaatcataggtaaccacgatgtc
aagagccataagtttttgccgattacacacagaatctcaaaggctagcattttggaatta
tccataaaaccatcagaattaaaatccaaggaagtgcacaccaaaactcttgaggagatc
aatattggggaagacttaactggtttcgtcaacaattcatcaggtaaccacttatggttg
acaatttctccagttttgaaggctaggatttccctactagatctagctgatgacaatgtc
aacttatcagaaactattgaatccgttttcccattaggttcagcccttcaagtaaaggtt
gcttctattgatcgcgagcatggctttgtcaacgccattggaaaagcccatgttgacata
aatatgaccacaatcaaagttggcgatgaattcccgggtcgtgttttgaaaatagctgaa
aaatatgttttattagatcttggtaacaaggtgacaggtatttccttcattacggacgcg
ctaaatgacttctccttatcattgaaggaaggttttggagacaaaatcaacaatgttatt
ccaactactgttctggcagttgatgcagaaaataagaaaatagaactatcccttcgttct
gctgctgcaaaaactcgttcgattaaatctcatgaagatttgaaacaaggcgatattgta
gatggtattattaagagtgtgaatgacaaaggtatttttgtttacttgagtaggaaagtt
gaagcctttgtccctgttagtaaattatctgattcttatttgaaggagtggaaaaagttt
tacaagccaatgcagtacgttctgggcaaggttgtcacttgcgatgaagattcccgtatt
tctctgacccttagagagtccgaaataaatggcgatttgaaggttttgaaggcctattcg
gatatcaaagctggtgatgttttcgatggtactgtaaaaaacgtcactgattttggtgtt
tttgtcaaactagataacacagttaatgttacgggtttggctcacattactgaaatcgca
gacaaaaaacctgaagatctttctgccctatttggtgttggtgacagagtaaaagccatt
gtcttaaaaacaaatctggaaaaaaagcaaatttccttgagcttgaaggcgtctcatttc
tctaaagaagccgaattgccttccactactacaggccaaccagaaaaggaggatgaggat
gaggatgaggtcatggctgatgctgattttaacgattccgacaacgaatctgatatcggg
gaccaaaatgccgtagttaccgataagaagactgaaatatcctcggatgggttgtccttg
agtgctggatttgattggactgcatccattttggatcaagcacaagaagaagagtctgaa
gaagatcaagaagattttactgaaaacagaaagcacaaacacaagagaagaaaggaaaaa
gttgttcaggataagaccattgatatcaacactagggcacccgaatctgttgcagacttt
gaacgtctactcatcggtaatccaaactcttcggtagtgtggatgaactatatggctttt
caattgcaactgagtgaaattgagaaggcacgagaactcgcagaacgtgcattgaagacc
atcaacttcagagaagaagccgagaagttgaatatttggattgcgatgctgaatttggaa
aatacttttggtaccgaagaaactttagaagatgtgtttagcagagcttgtcagtatatg
gactcttatattattcatacaaaactacttggtatttatgaaataagtgaaaagtttgac
aaagctgcagagttgttcaaagctacagctaaaaaatttggtagtgaaaaagtttctatc
tgggtatcctggggtgatttcttgataagccacaatgaagagcaagaggcacgtacgatt
ttgggcaatgctttgaaggccttagcaaagcgtaatcatatcgaagttgtccgtaagttt
gctcaattggaatttgcaaagggtgatccagaaaggggtcgctcgttattcgaaggtttg
gttgctgatgcaccaaagagaattgacttatggaacgtttatgtagaccaagaggtaaag
gcaaaggataagaaaaaggtggaagatttatttgagaggataataaccaaaaagataaca
aggaagcaagccaaattcttctttaataaatggttgcaatttgaagaatctcaaggtgac
gaaaagaccattgaatacgtcaaagctaaagctactgagtatgtcgccagccatgacgta
ccaaaaacagacgagtaa
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integrated database retrieval system