Saccharomyces paradoxus: SPAR_M03560
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Entry
SPAR_M03560 CDS
T08193
Name
(RefSeq) Rnt1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
spao
Saccharomyces paradoxus
Pathway
spao03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SPAR_M03560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spao03019
]
SPAR_M03560
03009 Ribosome biogenesis [BR:
spao03009
]
SPAR_M03560
03036 Chromosome and associated proteins [BR:
spao03036
]
SPAR_M03560
Enzymes [BR:
spao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
SPAR_M03560
Messenger RNA biogenesis [BR:
spao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SPAR_M03560
Ribosome biogenesis [BR:
spao03009
]
Eukaryotic type
90S particles
RNase
SPAR_M03560
Prokaryotic type
rRNA processing factors
SPAR_M03560
Chromosome and associated proteins [BR:
spao03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
SPAR_M03560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_3_N
Ribonuclease_3
Ribonucleas_3_3
dsrm
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
54632933
NCBI-ProteinID:
XP_033768543
UniProt:
A0A8B8UXU5
LinkDB
All DBs
Position
XIII:complement(740826..742241)
Genome browser
AA seq
471 aa
AA seq
DB search
MGSKVAGKKKTQNGNKLGNDNGSQQRENINTKKPSKANLKMSDYEYLEVIQLEHAVTKLV
ESYNKIIELSPNLVAYNEAVNNQDRVPVQILPSLSRYQLKLAAELKTLHDLKKDPILTEV
TDYENEFDTEQKQPILREINKADMEKLEKLEQIRREKKDTIDVNVYENLNEKEDEEEDEG
EDSYDPTKAGNNIKTAKWPPKLPEIQDLAIRARVFIHKSTIKDKVYLSGSEMINAHNERL
EFLGDSILNSVMTLIIYNKFPDYSEGQLSTLRMNLVSNEQIKQWSIMYNFHEKLKTNFDL
KDENSNFQNGKLKLYADVFEAYIGGLMEDDPRNNLPKIRKWLRKLAKPVIEEATRNQVAL
EKTDKLDMNAKRQLYSLIGYASLRLHYVTVKKPTAVDPNSIVECRVGDGTVLGIGVGRNI
KIAGIRAAENALRDKKMLDFYAKQRAAIPRSESVLKDPSQKNKKRKISDSS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgggctcaaaggtggcaggtaaaaagaaaacccagaatggaaataagttaggtaacgac
aatggttcacaacaacgggaaaatatcaatacaaagaagccttcgaaagccaaccttaag
atgtcagattacgaatatcttgaagtcatccaattagaacacgctgtgaccaagttggtg
gagtcttacaataaaataatcgaactttcaccaaatttggtagcttataatgaggccgta
aacaaccaagatagggtgcccgttcaaatacttccttctctatcgcgttatcaattaaaa
ctggctgctgaattgaaaactttgcacgatcttaaaaaagacccaattttgacagaagtt
actgattatgaaaacgaatttgataccgaacaaaagcaacccatattgcgagaaatcaat
aaagcagatatggaaaagttagagaagttagaacaaatcaggagggaaaagaaagacacg
attgacgtaaatgtatatgaaaatttaaatgagaaggaagacgaagaagaggatgaagga
gaagatagctacgacccaacaaaggccggtaataacatcaagacggcgaaatggcctcca
aaattaccagaaattcaagatttagcgatcagggccagagtgttcattcacaagtccacc
atcaaggataaagtttacttgtctgggtcagaaatgatcaacgcgcataacgaaagacta
gagttccttggcgattcgatcttaaattccgttatgacattaattatttataacaagttc
cctgattacagcgagggccagctatcaacattaaggatgaacttggtaagcaacgaacag
atcaaacaatggtcaataatgtataatttccatgagaaacttaagacaaattttgattta
aaggatgaaaattccaatttccaaaatggcaaactaaaactgtatgcagacgtgtttgag
gcttacattggcggtttgatggaagatgatccaaggaataatttgcccaaaataagaaaa
tggctaagaaagcttgccaaacctgtcattgaagaggccactcgtaatcaagttgcctta
gagaagacggataaacttgatatgaatgccaaaagacagttatactctttgattggctat
gcttcattacgtctacattatgtcactgtaaaaaaaccgacagcagttgatccgaattcc
atagttgagtgcagagtaggtgatggtaccgttttaggaattggtgtgggcagaaacatt
aaaatcgcaggtattagagcggcggaaaatgctcttcgtgacaaaaaaatgctagatttt
tacgcaaaacaaagagctgccattcctagaagtgaatctgtgctcaaggacccctcacaa
aagaataaaaaaaggaaaatttcagattcaagttga
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