Saccharomyces paradoxus: SPAR_N01390
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Entry
SPAR_N01390 CDS
T08193
Name
(RefSeq) Ipi3
KO
K14829
pre-rRNA-processing protein IPI3
Organism
spao
Saccharomyces paradoxus
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spao03009
]
SPAR_N01390
Ribosome biogenesis [BR:
spao03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
SPAR_N01390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WD40_Prp19
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_HPS5
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
KNTC1_N
Beta-prop_RIG_2nd
Beta-prop_VPS8
ZapB
EIF3I
TolA_bind_tri
CBM_19
Motif
Other DBs
NCBI-GeneID:
54633181
NCBI-ProteinID:
XP_033768770
UniProt:
A0A8B8UYC8
LinkDB
All DBs
Position
XIV:complement(293975..295642)
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AA seq
555 aa
AA seq
DB search
MDEQVIFTTNTSGTVASVHSFEQVNLRQCSTQSRNSCVQVGNKHLFIAQAQKALINVYNL
SGSFKRESVEQRLPLPEILKCLEVVENTGVQYDRIQGINHNLPEFNLPYLLLGSTESGKL
YIWELNSGFLLNVKPMAHYQSITKIKSILNGKYIITSGNDSRVIIWQTVDLVSSSNDDPK
PICILHDHTLPVTDFQVSSSQGKFLSCTDTKLFTVSQDATIRCYDLSLIGSKKKQEANEN
DVSIGKAPVLLATFTTPNAIKSIVLDPADRACYIGTAEGCFSLDLFYKLKGNAIVNLLPS
AGMNTVQKSRVFSLVQRNLVTSSGNQDLDALYAMGQLVCDNLLNSNVSCLEISMDGTLLL
IGDTEGKVSIAEIYSKQIIRTIQTLTTSQASVGEVTNLLVNPYRLESGNLLFEGEPKDKQ
SSNSNGHNSMKIPNLQRVIFDGKNKGHLHDIWYQIGEPETETDPSLALPLNHFNAYLEQV
KAQESIFTHIGKVSSDVKVIDNETNVTQSLDGIAAKDEEITELKANIEALTHAYKELRGM
HEKLYEEHQQVLDKQ
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggatgagcaagttatttttacaacaaatacctcagggacggtagcttctgtacactcg
ttcgaacaggtgaatttaagacagtgctctactcaatcaagaaatagttgtgtccaagta
gggaacaaacacttattcattgctcaagcgcaaaaagcattaatcaatgtctacaatttg
tcaggttcgttcaaaagagagtctgttgaacagcgcttaccattacctgaaatcctcaaa
tgtctagaagtagttgaaaatactggcgtgcagtatgatagaattcaaggtatcaaccat
aatttgccagaattcaatcttccatatcttttacttggttcaaccgaatcaggtaaattg
tacatatgggagctgaactcagggtttctattgaacgtaaagcctatggctcactaccaa
agtatcaccaagatcaagtctattttgaatggaaagtatataatcacctcgggtaacgat
tcaagggttattatatggcagacagttgacttagtgtcatcatccaatgatgatcctaag
cctatatgtatccttcacgatcatactttgcccgtgacagatttccaggtttcttccagt
caaggaaaatttctatcatgtactgatacgaaactattcacggtatcccaagatgctacg
attaggtgctacgatttgagtctaataggcagcaaaaagaaacaggaagcaaacgaaaat
gacgttagtattggcaaagcacctgtattgcttgcaacattcacaacacctaatgctatc
aaatctattgttcttgatcctgctgacagagcatgctatatcggtactgcagaaggttgt
ttttcactggatttattttacaaactaaagggtaatgccatcgttaatctgttaccatcc
gcaggtatgaacacagttcaaaaaagtagagttttttccttagtacaacgtaacttagtg
actagtagcggaaatcaggatttggatgcactatacgcaatgggtcaacttgtctgtgac
aatctcctaaattcgaatgtgtcgtgtctggaaatatcaatggatggtacattattatta
attggtgacacggagggaaaagtttctatcgcggaaatctactcaaagcagatcattaga
actatccaaactttaactacatcacaggcttcagttggagaggtgaccaacctcttagtc
aacccttacagactcgaaagtggaaacctactatttgaaggagaacccaaggacaaacaa
tcaagtaatagtaatggccacaactctatgaagataccaaacttgcaaagagttattttc
gatggtaaaaacaagggtcatttacacgatatctggtaccagataggagaaccagaaaca
gagacagaccccagccttgcattaccacttaatcattttaatgcttatttggagcaggtc
aaagcacaagaatccatttttacacatatcggtaaggtatcaagtgacgtgaaagtgatt
gacaatgaaaccaatgtcactcaatccttagacggcattgccgctaaagatgaagaaatt
actgaacttaaggccaacatagaagcgttaacccacgcctacaaggagttacgtggtatg
cacgaaaagctctacgaggaacaccaacaggtgctcgacaagcaataa
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