Saccharomyces paradoxus: SPAR_N02010
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Entry
SPAR_N02010 CDS
T08193
Name
(RefSeq) Dbp2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
spao
Saccharomyces paradoxus
Pathway
spao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPAR_N02010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spao03041
]
SPAR_N02010
03009 Ribosome biogenesis [BR:
spao03009
]
SPAR_N02010
Enzymes [BR:
spao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SPAR_N02010
Spliceosome [BR:
spao03041
]
Complex A
U1 snRNP components
U1 related factors
SPAR_N02010
Complex B
SPAR_N02010
Ribosome biogenesis [BR:
spao03009
]
Eukaryotic type
Pre-60S particles
Helicases
SPAR_N02010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-GeneID:
54633242
NCBI-ProteinID:
XP_033768831
UniProt:
A0A8B8UYP1
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All DBs
Position
XIV:411953..414597
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AA seq
546 aa
AA seq
DB search
MTYGGRDQQYNKTNYNSRGGDFRGGRSSDRNSYNDRPQGGNYRGGFGGRSNYNQPQELIK
PNWDEELPKLPTFEKNFYVEHESVRDRSDSEIAQFRKENEMTISGHDIPKPITTFDEAGF
PDYVLSEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPL
LAPGDGPIVLVLAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIV
IATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSAT
WPKEVKQLAADYLNDPIQVQVGSLELSASHNITQIVEVLSDFEKRDRLNKYLETASQDNE
YKTLIFASTKRMCDDITKYLREDGWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVA
ARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGLGAKLISIMR
EANQNIPPELLKYDRRSYGGGHPRYGGGRGGRGGYGRRGGYGGGRGGYGGNRQRDGGWGN
RGRSNY
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgacttacggtggtagagatcagcaatataacaagactaactacaattctagaggtggc
gacttccgcggcggaagaagctccgacagaaactcttacaatgacagaccacaaggcggt
aactaccgtggaggtttcggtggtcgttctaactacaaccaaccccaggaattgatcaaa
ccaaactgggatgaagaattaccaaaattgccaactttcgaaaagaatttctatgtcgaa
cacgaaagtgtccgcgacagatcggacagtgagattgctcagttcagaaaggaaaatgaa
atgactatttctggacacgatattccaaagccaatcaccactttcgatgaagccggtttc
ccagactacgtcttgagtgaagttaaggccgaaggctttgacaaaccaactggtattcaa
tgtcagggttggccgatggctttgtctggtagagacatggttggtatcgctgccactggt
tccggtaagactctgtcttattgtttaccaggtattgttcatatcaacgctcaaccatta
ttggctccaggcgatggtccaattgttttggttttggctccaacaagagaattagctgtt
caaatccaaacagaatgttccaagtttggtcatagttccagaatcagaaacacttgtgtc
tacggtggtgttccaaagagtcaacaaatcagagatttgtcccgcggttctgaaattgtt
attgctactccaggtagattaattgatatgctagaaattggtaagactaacttgaagaga
gttacttacttggttcttgatgaagctgatagaatgttagatatgggttttgaacctcaa
atcagaaagattgttgatcaaattagacctgatagacaaactttaatgtggtctgccact
tggccaaaggaggtgaagcaattggccgctgactatttgaacgatccaattcaagttcaa
gttggctcactagaattgtccgcttctcataacattacccaaattgtcgaagttctttcc
gatttcgaaaagagagatcgtttgaacaagtacttggaaacagcctctcaagataacgaa
tataagacattgatctttgcgtctacgaagagaatgtgcgatgatattaccaagtatctg
agagaggatggatggccagctttggctattcatggtgacaaagaccaaagagaacgtgac
tgggttttacaagagtttagaaacggtagatccccaattatggttgctacagatgtggct
gccagaggtatcgatgtcaaaggtatcaattacgttattaactacgacatgccaggtaac
attgaagattatgttcacagaattggtagaactggtagagcaggtgccactggtactgcc
atctctttcttcaccgaacaaaacaaaggtttaggtgccaaattaatctctatcatgaga
gaagctaatcaaaatattcctcctgaattattgaaatacgacaggagatcttatggtggt
ggtcacccaagatatggcggtggccgcggcggtcgtggtggctatggccgtagaggtggt
tatggtggtggccgtggtggttacggtggcaacaggcagagagatggtggctggggtaac
agaggtcgttcgaactattga
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