Saccharomyces paradoxus: SPAR_N03030
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Entry
SPAR_N03030 CDS
T08193
Name
(RefSeq) Dom34
KO
K06965
protein pelota
Organism
spao
Saccharomyces paradoxus
Pathway
spao03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SPAR_N03030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spao03019
]
SPAR_N03030
Messenger RNA biogenesis [BR:
spao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
SPAR_N03030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
CAMSAP_CKK
SNF2-rel_dom
RNA12
Motif
Other DBs
NCBI-GeneID:
54633344
NCBI-ProteinID:
XP_033768933
UniProt:
A0A8B8UYY9
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All DBs
Position
XIV:618774..619934
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AA seq
386 aa
AA seq
DB search
MKVISLKKDSFNKGGAVITLLPEDKEDLFTVYQIIDKDDELIFKKKFTSKLDEAGKKKST
DLVKLKIKVISEDFDMKDEYLKYKGVTVTDESGASNVDIPVGKYLSFTLDYVYPFTIIKQ
NFNKFMQKLLNEACNIEYKSDTAAVVLQEGIAHVCLVTSSSTILKQKIEYSMPKKKRTTD
ILKFDEKTEKFYKAIYNAMKKDLNFDKLKTIILCSPGFYAKILMDKIFQYAEEEHNKTIL
DNKGMFFIAHCSTGYLQGINEVLKNPLYASKLQDTKYSKEIMVMDEFLLHLNKDDDKAWY
GEKEVVKAADYGAISYLLLTDKVLHSDNIAQREKYLHLMDSVESNGGKALVLSTLHSLGE
ELDQLTGIACILKYPLPDLDEDDDEE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttattagtctgaaaaaggattcttttaacaaaggaggggcagtgattactctg
ttgccggaagacaaggaagatctgtttactgtttatcaaattattgataaagatgacgag
ttgatatttaagaagaagttcacctctaaacttgatgaagctggtaagaaaaaaagtaca
gatttggttaagttaaagattaaagtaatatctgaggattttgatatgaaggatgagtac
ttgaaatataaaggtgttactgttaccgacgaaagtggggctagtaatgtcgacatacct
gttggtaaatatttgagttttacccttgattatgtatatcccttcactatcataaaacaa
aattttaataagttcatgcaaaaacttttaaacgaagcctgcaatattgagtataaatca
gacaccgcagcggtggttttacaggaaggaatcgcccatgtttgtttagtgacatcctct
tctactattctaaaacaaaaaattgagtatagtatgccaaaaaagaagaggaccactgat
atattgaagtttgatgaaaaaactgaaaaattttataaagcaatttacaatgcaatgaag
aaagatttaaattttgacaaattgaagactattattctttgttctccaggcttctacgct
aagatattaatggacaaaattttccagtatgccgaagaggaacacaataagacaattctc
gacaacaaaggaatgttctttatagcccactgctccacgggctacttacagggcattaat
gaagttttgaagaatccattatatgcttcaaaactgcaagatactaagtactccaaagaa
atcatggtgatggatgaatttttgctgcacttaaacaaggatgacgataaagcttggtat
ggtgaaaaagaagttgttaaagctgcagattatggggcgattagttatttactgttaacg
gacaaagttttgcattccgataatattgcacaaagagagaagtatctacacctaatggac
tctgttgagagcaatggagggaaagcattggtattaagtactttgcattctcttggagag
gaacttgaccaattgacaggtatagcctgcatcctcaagtacccactcccagatcttgac
gaagacgatgatgaggagtga
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