Saccharomyces paradoxus: SPAR_N03080
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Entry
SPAR_N03080 CDS
T08193
Name
(RefSeq) Vps27
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
spao
Saccharomyces paradoxus
Pathway
spao03250
Viral life cycle - HIV-1
spao04144
Endocytosis
spao04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
SPAR_N03080
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
SPAR_N03080
04145 Phagocytosis
SPAR_N03080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spao04131
]
SPAR_N03080
Membrane trafficking [BR:
spao04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
SPAR_N03080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Vps27_GAT-like
FYVE
UIM
AtMg01350
UIM_2
FYVE_2
GAT
Motif
Other DBs
NCBI-GeneID:
54633349
NCBI-ProteinID:
XP_033768938
LinkDB
All DBs
Position
XIV:<627875..>629743
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AA seq
622 aa
AA seq
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MSVSTPNELDALIEQATSESIPNGDLDLAIALEISDVLRSRRVNPKDSMRCIKKRILNTA
NNPNTQLSSWKLTNICVKNGGTPFIKEICSREFMDTMEHVILREDSNEELSELVKTIVYE
LYVAFKNDSQLNYVAKVYDKLISRGIKFPEKLTLSNSPTAMFDSKTPADWIDSDACMICS
KKFSLLNRKHHCRSCGGVFCQEHSSNSIALPDMGIYELVRVCDSCFEDYDLKRHDESKKS
KKHRHRKRRDKDYSTPENEEELIKRAIELSLKESRNSASSEPIVPIVESKSAGKIEKIEE
EEDPDLEAAIQESLREAEEAKLRSERQQATRQLQPQQQPPKPQPIQSVDLSDEEKDNIYM
FASLVEKLKSRPLNEILEDSKLQSLAQKVFSSKARLNYALNDKAQKYNTLIEMNGKISEI
MNIYDRLLEQQLQSINLSQQYTLPQVPSDPYSYPTENMANQAQNYQIPPLQQPSSHQYKP
QQEISYQQPVKANPSPTTNIDHLKTINVVPHAQQESQAQVELAPSDPPYPKEEGDDEEKQ
TAQDEGSSTQESRERPYPVETETGENSRNERPQGITRYDFPTVPARKVVQPELTVPISAS
PSEIPIKEERPPTPQEELLIEL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcagcacaccaaatgagttagatgcattaatagaacaagccactagtgagagc
attcccaatggtgaccttgatctcgccatagcgttggaaatttcagatgtgttaagatct
agaagggtaaatcctaaagattctatgcgttgtataaagaaaaggattctcaatacggca
aataatccaaatacccaattatcttcctggaagcttaccaacatatgtgtaaaaaatggt
ggaacaccatttattaaggaaatatgttccagagagttcatggataccatggaacatgtt
attttaagagaggatagcaacgaggagctgtctgagttggtgaagacgatagtgtatgaa
ctatacgttgccttcaagaatgattcgcaactaaactacgtggcaaaagtttatgataaa
ctaatatctcggggcatcaaattccctgaaaagttaacactttccaattctccgactgca
atgtttgactcgaaaacaccagcagattggatcgattctgatgcttgcatgatttgttcc
aaaaagttttctttgctgaataggaaacaccattgtcgttcctgtggtggtgttttctgc
caagagcactcatcgaatagtatagcgttacctgatatggggatatatgagctggtcaga
gtatgtgatagctgctttgaagactacgatttgaagaggcatgacgaaagtaaaaaatca
aagaagcatcgtcacagaaaaagaagggacaaggactactcaactcctgaaaacgaagag
gagctgataaaaagagcaatagaactctccttaaaagaatcaagaaatagcgctagtagt
gagcctatagtcccaattgtggaatcaaagagtgcggggaagatagaaaagatagaagaa
gaagaagatccagatttagaagctgccattcaagaaagcttgagagaagctgaagaagca
aaactacgcagtgagcgtcaacaagccaccagacagcttcaaccgcaacagcaaccacct
aaacctcaacctattcagtccgttgatttatctgatgaggagaaagacaacatatacatg
tttgcatcactcgttgaaaaattgaaatcgaggcccttgaacgaaattctagaagactcc
aaattacagagtttggcacaaaaagtatttagttccaaagcaagattgaattatgcctta
aatgataaagctcaaaaatacaatactctaatagaaatgaacggcaagatttcggaaatt
atgaatatatacgatagattattggagcaacagctacaaagcatcaatttgtctcaacaa
tacacacttccgcaagtcccttctgacccgtacagttacccaacggagaatatggccaat
caggcgcaaaattatcaaatacctcctctccagcaaccatcatctcatcagtacaaaccg
caacaggagatttcataccaacagccagtaaaagcgaacccatctcctaccactaatatt
gatcacttaaaaaccattaatgtggtaccacacgcacagcaagagtctcaagcgcaagtt
gaacttgcgccttctgacccaccatatccaaaggaagagggcgacgacgaagaaaaacaa
acagcgcaagacgagggatcttctacccaagaatcccgcgaaaggccgtatcccgtagaa
acagaaactggagaaaattcaagaaatgaacggcctcaaggtattacacgttacgatttc
ccgactgttcctgcacgcaaagttgtccaaccggagctaactgtaccaatctctgcaagc
ccctctgaaattccgatcaaagaagaaaggccgccaactcctcaggaggaactactaata
gagctttga
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