Saccharomyces paradoxus: SPAR_O00330
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Entry
SPAR_O00330 CDS
T08193
Name
(RefSeq) Hrp1
KO
K14411
RNA-binding protein Musashi
Organism
spao
Saccharomyces paradoxus
Pathway
spao03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SPAR_O00330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spao03019
]
SPAR_O00330
Messenger RNA biogenesis [BR:
spao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
SPAR_O00330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Glyco_H_20C_C
Motif
Other DBs
NCBI-GeneID:
54633462
NCBI-ProteinID:
XP_033769037
UniProt:
A0A8B8UZ46
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All DBs
Position
XV:78399..80000
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AA seq
533 aa
AA seq
DB search
MSSDEEDFNDIYGDDKPTTTEEVKKEEEEQKKAGSGTSQLDQLAALQALSSSLNKLNNPN
SNNSSSNNSNQDSSSSKQDGTANDKEGSNEDTKNEKQQESATSANANANASSAGPSGLPW
EQLQQTMSQFQQPSSQSPPQQQVTQSKEERSKADLSKESCKMFIGGLNWDTTEDNLREYF
GKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKTQHILDGKVIDPKRAIPRDEQ
DKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDR
VCQNKFIDFKDRKIEIKRAEPRHMQQKSSNNGGNNSGNNMNRRGGNFGNQGDFNQMYQNP
MMGGYNPMMNPQAMTDYYQKMQEYYQQMQKQTGMDYTQMYQQQMQQMAMMMPGFAMPPNA
MTLNQPQQDSNATQGSPTPSDSDNNKSNDVQTIGNTSNADSGSPPLNLPNGPKGPSQYND
DHNSGYGYNRDRSDRNDRDRDYNHRSGGNHRRNGRGGRGGYNRRNNGYHPYNR
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgacgaagaagactttaacgacatttacggcgacgataagcctaccactact
gaggaagtgaaaaaagaagaagaagaacagaaaaaggctggcagtggtacctcacaatta
gatcaactagccgcactacaagcattatcttctagcttgaacaaattaaataatccaaat
agtaacaacagtagtagtaataatagtaaccaagactcatcttctagtaagcaagatggc
actgcgaatgacaaagaaggttccaatgaagacactaaaaatgagaaacaacaagaaagc
gctacatcagcaaacgccaatgccaacgctagttctgcaggaccttctggcttaccttgg
gaacaacttcaacaaaccatgtcacaattccagcaaccatcttctcaatcaccacctcaa
caacaagtaactcaaagcaaagaggaacgttcgaaagcagatttgtcaaaagaaagttgc
aagatgtttattggtggtctgaattgggatacaacagaagataatcttcgcgaatatttc
ggtaagtatggtaccgtcacagatttgaaaatcatgaaagatcctgccactggtagatct
agagggttcggtttcttatcgtttgaaaaaccttctagtgttgatgaagtggtgaagaca
cagcatattctcgatggtaaagttatcgacccaaaaagagccattccaagagatgaacaa
gataaaaccggtaaaatattcgtcggtggtattggtccagatgtgagaccaaaggaattt
gaagaatttttctctcaatggggcacaattatcgatgctcaactaatgttggataaggat
accggtcaatcaagaggatttggttttgtgacttatgactctgctgacgccgttgacaga
gtttgtcagaataaattcatcgatttcaaagatcgcaagatcgaaattaagagagctgag
ccaagacatatgcaacaaaaatcatcgaacaatggtggtaacaatagcggaaacaacatg
aatcgtcgtggcggcaactttggtaatcaaggcgacttcaaccaaatgtaccaaaaccca
atgatgggaggttacaatccaatgatgaatccgcaagcaatgacagattactatcaaaag
atgcaagaatattaccaacaaatgcaaaagcaaactggcatggattatacccaaatgtac
caacaacaaatgcaacaaatggcaatgatgatgccagggtttgccatgccacctaatgca
atgactttaaaccaaccacaacaagactcaaatgctactcaaggttccccaacaccttca
gattccgacaataataagtcaaatgatgtccagactattggtaatacatcaaacgctgac
tcaggttctccgccattgaatctacctaatggtccaaagggcccatcacaatacaatgat
gaccacaacagtggctatggctacaaccgcgatcgtagtgatcgtaatgatcgtgaccgc
gattacaatcaccgtagtggtggaaaccacagaagaaatggccgtggtggtcgtggtgga
tacaatagacgtaataatggctaccatccatataataggtaa
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