KEGG   Saccharomyces paradoxus: SPAR_O00590
Entry
SPAR_O00590       CDS       T08193                                 
Name
(RefSeq) Rfc4
  KO
K10755  replication factor C subunit 2/4
Organism
spao  Saccharomyces paradoxus
Pathway
spao03030  DNA replication
spao03410  Base excision repair
spao03420  Nucleotide excision repair
spao03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:spao00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SPAR_O00590
   03410 Base excision repair
    SPAR_O00590
   03420 Nucleotide excision repair
    SPAR_O00590
   03430 Mismatch repair
    SPAR_O00590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spao03032]
    SPAR_O00590
   03036 Chromosome and associated proteins [BR:spao03036]
    SPAR_O00590
   03400 DNA repair and recombination proteins [BR:spao03400]
    SPAR_O00590
DNA replication proteins [BR:spao03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    SPAR_O00590
  DNA Replication Termination Factors
   ELG1-RFC complex
    SPAR_O00590
Chromosome and associated proteins [BR:spao03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    SPAR_O00590
DNA repair and recombination proteins [BR:spao03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     SPAR_O00590
  Check point factors
   HRAD17(Rad24)-RFC complex
    SPAR_O00590
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_14 AAA_16 AAA_22 RuvB_N nSTAND3 Viral_helicase1 AAA_3 RCF1-5-like_lid TniB Mg_chelatase AAA_assoc_2 NTPase_1 AAA_19 NB-ARC MeaB FtsK_SpoIIIE KTI12 AAA_24 RNA_helicase NPHP3_N
Other DBs
NCBI-GeneID: 54633488
NCBI-ProteinID: XP_033769063
UniProt: A0A8B8UZB6
LinkDB
Position
XV:complement(126984..127955)
AA seq 323 aa
MSKTLSLQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVH
CLAHELLGNSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMT
AGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLKRLLEIIK
LEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFKIVDSPHPLIVKKML
LASNLEDSIQILRTDLWKKGYSSIDIVTTSFRVTKNLAQVKESVRLEMIKEIGLTHMRIL
EGVGTYLQLASMLAKIHKLNNKA
NT seq 972 nt   +upstreamnt  +downstreamnt
atgtccaaaactttatctttgcaacttccatgggttgagaaataccgtcctcaagtctta
tccgatatagttggtaataaagagaccattgatagacttcagcagatcgctaaagatggt
aacatgccccatatgatcatatctggtatgcctggtataggtaagaccacttcggtacat
tgccttgcccacgagctcctcggcaattcctatgctgacggtgttttggaattgaacgct
tcagatgacagaggtattgatgtcgtcagaaaccaaataaaacattttgcccaaaagaaa
ctacatctaccgccagggaaacataaaattgttattcttgatgaggcggattccatgact
gcgggtgctcagcaagcgttgagaaggaccatggaactgtactctaattctacgaggttt
gcatttgcttgtaatcaatcaaacaagatcatcgaaccgctgcaaagtagatgtgcaatt
ttaagatattctaaactatcagatgaagacgttttaaaacgtctcttagagatcataaaa
cttgaagacgtaaagtatacaaatgatgggttggaagcaatcatttttacagccgaaggt
gacatgagacaagcaataaacaatctacaaagtacagtagcagggcatggtttagtgaac
gcagacaatgtcttcaaaatcgtcgattctcctcatcctctaatagtgaagaaaatgtta
ctagcctccaacctagaagattcaattcaaatcttaagaacggatctttggaaaaaaggt
tattcttcgattgacatcgtgacaacatcttttcgagttactaaaaatttggcacaagtg
aaagaatcggtaaggttggaaatgataaaagaaattggtcttactcatatgagaattctg
gagggtgttggaacgtacttgcaattggctagtatgttagcaaaaattcataaactaaat
aataaagcctga

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