Saccharomyces paradoxus: SPAR_O00590
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Entry
SPAR_O00590 CDS
T08193
Name
(RefSeq) Rfc4
KO
K10755
replication factor C subunit 2/4
Organism
spao
Saccharomyces paradoxus
Pathway
spao03030
DNA replication
spao03410
Base excision repair
spao03420
Nucleotide excision repair
spao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPAR_O00590
03410 Base excision repair
SPAR_O00590
03420 Nucleotide excision repair
SPAR_O00590
03430 Mismatch repair
SPAR_O00590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spao03032
]
SPAR_O00590
03036 Chromosome and associated proteins [BR:
spao03036
]
SPAR_O00590
03400 DNA repair and recombination proteins [BR:
spao03400
]
SPAR_O00590
DNA replication proteins [BR:
spao03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
SPAR_O00590
DNA Replication Termination Factors
ELG1-RFC complex
SPAR_O00590
Chromosome and associated proteins [BR:
spao03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
SPAR_O00590
DNA repair and recombination proteins [BR:
spao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
SPAR_O00590
Check point factors
HRAD17(Rad24)-RFC complex
SPAR_O00590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_14
AAA_16
AAA_22
RuvB_N
nSTAND3
Viral_helicase1
AAA_3
RCF1-5-like_lid
TniB
Mg_chelatase
AAA_assoc_2
NTPase_1
AAA_19
NB-ARC
MeaB
FtsK_SpoIIIE
KTI12
AAA_24
RNA_helicase
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
54633488
NCBI-ProteinID:
XP_033769063
UniProt:
A0A8B8UZB6
LinkDB
All DBs
Position
XV:complement(126984..127955)
Genome browser
AA seq
323 aa
AA seq
DB search
MSKTLSLQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVH
CLAHELLGNSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMT
AGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLKRLLEIIK
LEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFKIVDSPHPLIVKKML
LASNLEDSIQILRTDLWKKGYSSIDIVTTSFRVTKNLAQVKESVRLEMIKEIGLTHMRIL
EGVGTYLQLASMLAKIHKLNNKA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaactttatctttgcaacttccatgggttgagaaataccgtcctcaagtctta
tccgatatagttggtaataaagagaccattgatagacttcagcagatcgctaaagatggt
aacatgccccatatgatcatatctggtatgcctggtataggtaagaccacttcggtacat
tgccttgcccacgagctcctcggcaattcctatgctgacggtgttttggaattgaacgct
tcagatgacagaggtattgatgtcgtcagaaaccaaataaaacattttgcccaaaagaaa
ctacatctaccgccagggaaacataaaattgttattcttgatgaggcggattccatgact
gcgggtgctcagcaagcgttgagaaggaccatggaactgtactctaattctacgaggttt
gcatttgcttgtaatcaatcaaacaagatcatcgaaccgctgcaaagtagatgtgcaatt
ttaagatattctaaactatcagatgaagacgttttaaaacgtctcttagagatcataaaa
cttgaagacgtaaagtatacaaatgatgggttggaagcaatcatttttacagccgaaggt
gacatgagacaagcaataaacaatctacaaagtacagtagcagggcatggtttagtgaac
gcagacaatgtcttcaaaatcgtcgattctcctcatcctctaatagtgaagaaaatgtta
ctagcctccaacctagaagattcaattcaaatcttaagaacggatctttggaaaaaaggt
tattcttcgattgacatcgtgacaacatcttttcgagttactaaaaatttggcacaagtg
aaagaatcggtaaggttggaaatgataaaagaaattggtcttactcatatgagaattctg
gagggtgttggaacgtacttgcaattggctagtatgttagcaaaaattcataaactaaat
aataaagcctga
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