Saccharomyces paradoxus: SPAR_O00630
Help
Entry
SPAR_O00630 CDS
T08193
Name
(RefSeq) Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
spao
Saccharomyces paradoxus
Pathway
spao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SPAR_O00630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spao03400
]
SPAR_O00630
DNA repair and recombination proteins [BR:
spao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SPAR_O00630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Inhibitor_I9
Motif
Other DBs
NCBI-GeneID:
54633492
NCBI-ProteinID:
XP_033769067
UniProt:
A0A8B8UZ75
LinkDB
All DBs
Position
XV:132786..135680
Genome browser
AA seq
964 aa
AA seq
DB search
MSSTRPELKFSDVSEERSFYKKYTGLPKTPIKTIRLVDKGEYYTVIGSDAIFVADSVYHT
QSVLKNCQLDPVTAKNFHEPTKYVTVSLQVLATLLKLCLLDLGYKVEIYDKSWKLIKSAS
PGNIEQVNELMNMNIDSSIIIASLKVQWNSQDGNCVIGVAFIDTTAYKVGMLDIVDNEVY
SNLESFLIQLGVKECLVQDLTLNSNSNTEIQKVINVIDRCGCVVTLLKNSEFSEKDVELD
LTKLLGDDLALSLPQKYSKLSMGACNALIGYLQLLSEQDQVGKYELVEHKLKEFMKLDAS
AIKALNLFPQGAQNPFGSNNLAVSGFTSAGNTGKVTSLFQLLNHCKTNAGVRLLNEWLKQ
PLTNIDEINKRHDLVDYLIDQIELRQMLTAEYLPMVPDIRRLTKKLNKKGNLEDVLKIYQ
FSKRIPEIVQAFSSFLEDDSPTESVKELVRSTWLTPLSHHVEPLSKFEEMVETTVDLDAY
EENNEFMIKVEFNEELAKIRSKLDALREEIHSIHLDSAEDLGFDPDKKLKLENHHLHGWC
MRLTRNDAKELRKHKKYIELSTVKAGIFFSTKQLKSIANETNILQKEYDKQQSALVREII
NITLTYTPVFEKLSLVLAHLDVISSFAHASSYAPIPYIRPKLHPMNSERRTHLLSSRHPV
LEVQDDISFISNDVTLESGKGDFLIITGPNMGGKSTYIRQVGVISLMAQIGCFVPCEEAE
IAVVDAILCRVGAGDSQLKGVSTFMVEILETASILKNASKNSLIIVDELGRGTSTYDGFG
LAWAIAEHIAGKIGCFALFATHFHELTELSEKLPNVKNMHVVAHIEKNSREQKHDDEDIT
LLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKANELDDLKTSNEELKKAKLSLQEVN
EGNIRLKALLKEWIRKVKEEGLDDPSKISEEASQHKIQELLRAIASEPENENDNYLKHIK
ALLL
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctactagaccagagctgaaattctctgatgtatcagaagaaagaagcttctat
aaaaagtatacaggtttaccgaagacgcccataaagaccattagattagtggataaaggc
gaatattatacagttataggttcggatgcgatatttgttgctgattcggtgtatcatacc
caatctgttttaaaaaactgtcaattggaccctgtgacggcgaaaaacttccatgaaccc
actaaatatgttactgtttcgcttcaggtccttgccactctgctgaaattatgtttgtta
gatctgggctacaaagttgagatttacgataagagttggaagttaattaagagtgcatct
ccagggaacatcgagcaagtcaatgagttgatgaatatgaacattgactcgagtatcatc
attgcgagcttgaaagttcaatggaattctcaggatggaaattgcgttattggagttgca
ttcattgataccactgcctacaaagttggtatgcttgatattgtcgataatgaagtgtat
tccaatctagagagtttcttgattcaattgggtgtgaaggaatgtttggtgcaggactta
acactgaattcaaactccaatactgaaatacagaaagtaatcaatgtaattgatcgttgt
ggatgtgtcgttacgttattgaaaaactcagaattttctgaaaaggacgtcgaactggac
ctaactaagttattgggcgatgatttagctttatcgttgccccagaaatactctaaatta
tctatgggtgcatgcaatgcattgatcggctatttacagttgctatcagagcaagatcaa
gtgggcaagtatgaattagttgaacataaattaaaggagtttatgaagttagatgcctct
gccattaaagcccttaatctattcccacaaggagcacaaaatccattcggcagcaacaac
ttagctgtctctgggtttacgagtgctggtaacaccggtaaagtaacttctcttttccag
ttgctgaatcattgtaaaacaaatgccggtgttagacttttaaatgaatggttgaagcaa
ccactaaccaatattgacgaaattaacaaaagacatgacttagttgactatctgattgac
caaattgagttaaggcagatgttgaccgctgaatatttacccatggttccagatattcgt
agattgactaagaagttaaataaaaagggaaacttagaggatgtcttgaaaatttatcag
ttcagtaaaagaataccagaaattgttcaagctttcagttcgttcttagaggatgatagc
ccaactgaatcagtaaaggaactagtccgctctacttggttaactccgctaagccaccat
gttgaaccattgtccaaattcgaagaaatggttgaaacaaccgttgatttggatgcttat
gaagaaaataatgaattcatgattaaagtcgagtttaatgaagaattggcgaagataaga
agtaaactggatgcgttgcgtgaggaaatccattcaatccatctagattctgctgaagat
ttgggattcgatccagacaaaaaactgaagttggagaaccatcatctgcatggttggtgt
atgagactgacacgtaatgatgccaaggaattacgtaaacataaaaagtacatcgagtta
tcgacagtaaaagcgggtatattttttagtaccaaacagttaaagtcgattgccaacgaa
accaatattcttcaaaaggagtacgacaaacaacaatccgctttggttagagaaattata
aatatcacattgacatacacaccggtttttgagaaattatccttagtcttagcgcatttg
gatgtcatatcctcttttgctcatgcttcgtcgtatgcccctataccatatataaggccc
aagttgcatcctatgaattcggaaagaaggacgcacctattaagttctcgtcatccagtg
ctggaagtgcaagatgatataagttttatatctaatgatgtcacattagagagcggcaag
ggcgatttcctaattataacaggaccaaatatggggggtaaatctacttacatcagacag
gttggtgtaatttcgttgatggctcaaattggttgttttgtgccttgtgaagaagctgaa
attgccgtagtagatgcaattctttgcagagtcggtgcaggagattcccaattgaaaggc
gtctccacatttatggttgaaatattagaaacagcttctatattaaagaatgcgagcaag
aattctttgattattgttgatgagctaggacgtggtacaagtacttacgatggctttggt
ctagcttgggcgattgctgaacatattgcaggtaaaattggatgtttcgctttgtttgcg
acccattttcatgaattgacagagttatctgagaaattgcccaacgtcaagaatatgcat
gttgttgcacatattgagaaaaattctagggaacaaaaacatgacgatgaggacattacg
ctattatataaagttgagcctggtatttcagatcaatcttttggtattcacgttgcagaa
gtcgttcaatttccagaaaaaattgtaaaaatggctaaacgtaaagcgaatgaattggac
gatctgaaaactagtaatgaagaattgaaaaaagctaaattatcattgcaggaagttaat
gaaggtaatattcgtttgaaggccctactaaaagagtggattagaaaagtgaaggaggag
ggcttagacgatccaagcaaaatttctgaagaagcttctcagcacaaaatacaagagctg
ctgcgtgctatagcgagtgaaccggaaaacgaaaatgacaactatttgaaacatataaaa
gccttgttgttataa
DBGET
integrated database retrieval system