Saccharomyces paradoxus: SPAR_O02490
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Entry
SPAR_O02490 CDS
T08193
Name
(RefSeq) Rpo31
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
spao
Saccharomyces paradoxus
Pathway
spao03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SPAR_O02490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spao03021
]
SPAR_O02490
Enzymes [BR:
spao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SPAR_O02490
Transcription machinery [BR:
spao03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
SPAR_O02490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
54633678
NCBI-ProteinID:
XP_033769253
UniProt:
A0A8B8UZV3
LinkDB
All DBs
Position
XV:complement(529053..533435)
Genome browser
AA seq
1460 aa
AA seq
DB search
MKEVVVSETPKRIKGLEFSALSAADIVAQSEVEVSTRDLFDLEKDRAPKANGALDPKMGV
SSSSLECATCHGNLASCHGHFGHLKLALPVFHIGYFKATIQILQGICKNCSAILLSETDK
RQFLHELRRPGVDNLRRMGILKKILDQCKKQRRCLHCGALNGVVKKAAAGAGSAALKIIH
DTFRWVGKKSAPEKDIWVGEWKEVLAHNPELERYVKRCMDDLNPLKTLNLFKQIKSADCE
LLGIDATVPSGRPETYIWRYLPAPPVCIRPSVMMQDSPASNEDDLTVKLTEIVWTSSLIK
AGLDKGISINNMMEHWDYLQLTVAMYINSDSVNPAMLPGSSNGGGKVKPIRGFCQRLKGK
QGRFRGNLSGKRVDFSGRTVISPDPNLSIDEVAVPDRVAKVLTYPEKVTRYNRHKLQELI
VNGPNVHPGANYLLKRNEDARRNLRYGDRMKLAKNLQIGDVVERHLEDGDVVLFNRQPSL
HRLSILSHYAKIRPWRTFRLNECVCTPYNADFDGDEMNLHVPQTEEARAEAINLMGVKNN
LLTPKSGEPIIAATQDFITGSYLISHKDSFYDRATLTQLLSMMSDGIEQFDIPPPAVMKP
YYLWTGKQVFSLLIKPNHNSPVVINLDAKNKVFVPPKSKSLPNEMSQNDGFVIIRGSQIL
SGVMDKSVLGDGKKHSVFYTILRDYGPQEAASAMNRMAKLCARFLGNRGFSIGINDVTPA
DDLKQKKEELVEIAYRKCDELITLFNKGELETQPGCNEEQTLEAKIGGLLSKVREEVGDV
CINELDNWNAPLIMATCGSKGSTLNVSQMVAVVGQQIISGNRVPDGFQDRSLPHFPKNSK
TPQSKGFVRNSFFSGLSPPEFLFHAISGREGLVDTAVKTAETGYMSRRLMKSLEDLSCQY
DNTVRTSANGIVQFTYGGDGLDPLEMEGNAQPVNFNRSWDHAYNITFNNQDKGLLPYAIM
ATANEILGPLEERLVRYDNSGSLVKRGDLDKAEYVDQYDAERDFYHSLREYVNLKATALA
NLRKSRGMLGLLEPPTKELQDIDPDESVPNNVKTSVSQLYRISEKSVRKFLEIALFKYRK
ARLEPGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKVISTPI
INAVLVNDNDERAARVVKGRVEKTLLSDVAFYVQDVYKDNLSFIQVRIDLGTIDKLQLEL
TIEDIAVAITRASKLKIQASDVNIIGKDRIAINVFPEGYKAKSISTSTKEPSENDVFYRM
QQLRRALPDVVVKGLPDISRAVINIRDDGKRELLVEGYGLRDVMCTDGVIGSRTTTNHVL
EVFSVLGIEAARYSIVREINYTMSNHGMSVDPRHIQLLGDVMTYKGEVLGITRFGLSKMR
DSVLQLASFEKTTDHLFDAAFYMKKDAVEGVSECIILGQTMSIGTGSFKVVKGTNISEKD
LVPKPCLFESLSNEAVLKSN
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagtcgttgttagtgaaaccccgaaaagaattaaagggctggaatttagcgct
ctaagcgctgccgatattgtcgcccagtctgaagtggaagtatctactagagatcttttc
gacttagagaaggatcgtgctcccaaggcgaatggtgctttagaccctaagatgggtgtc
tcttcctccagtctcgaatgtgcaacctgtcacggcaacttggcatcgtgccatggccat
tttggtcacttgaaattagctttgcctgtttttcacattgggtacttcaaagccaccatc
caaatactgcaaggtatctgtaaaaactgttctgcaatattgttatcagaaacagataaa
agacaatttttgcatgaattacgtcgtccaggcgtggataatttaagacgtatgggtata
ctaaaaaagattttggaccaatgtaagaaacaaagaagatgtctacattgtggtgctctt
aatggtgttgtgaaaaaagccgctgctggtgctggttcagccgcgttgaagattattcat
gatacatttcgttgggtaggtaaaaaatcggctcctgaaaaggatatttgggtgggtgag
tggaaagaagttctcgctcataacccagaactagagcgttatgtgaaacgttgtatggac
gatttgaatccattaaaaactttgaaccttttcaagcaaattaagtcagcagattgtgaa
ttacttggtatagatgcaaccgttccatctggtagaccagagacttacatttggagatat
ttgcccgcaccgccagtttgtataaggccttctgttatgatgcaagactctccagcatct
aacgaagatgacttgacagtaaagctaacagaaatagtttggacttcatctttgattaaa
gccggccttgacaagggtatttccatcaataacatgatggagcattgggattacttacaa
ttaactgtagcaatgtatatcaactcggactcagtcaatcctgccatgctaccaggctca
tccaatggtggcggaaaagtcaaaccaatcagagggttctgccaaagactaaagggtaaa
caaggtagatttagaggtaatttgtctggtaagcgtgttgatttttctggtagaactgtt
atttctcctgacccaaacttgtccattgacgaggttgccgtcccagatcgtgtcgcaaag
gtgttgacataccccgaaaaggtaaccagatacaatagacataaattacaagaattgatc
gtgaacgggcccaatgtccatcctggtgccaattatttgctgaaaagaaacgaagatgca
agaagaaatttaagatatggtgatcgcatgaagctagccaagaatttacaaattggtgat
gttgtcgaaagacatttagaagacggtgatgtggtcctatttaaccgtcagccatcttta
catagactgtcgattttatcgcattatgctaagatccgtccttggagaacctttaggtta
aatgaatgtgtttgcacaccttataatgctgacttcgacggtgatgaaatgaatttgcat
gttccacaaaccgaagaggctcgtgcagaagctatcaatttaatgggtgtgaaaaacaat
ctgttaacacctaaatcaggtgaacctattattgcggctacacaagattttatcactggt
tcatacttaatatcacataaagattctttctatgatcgtgctacattaactcaactattg
tctatgatgtctgacggtatcgaacaatttgacataccgcctcccgctgtcatgaagccg
tattacttatggactggtaaacaagtgttttcacttttgataaaaccaaatcacaattcc
ccagtggtaataaacctagacgcaaaaaacaaagtctttgtacctccaaaatcgaaatcc
ctaccaaatgaaatgtcacaaaacgatgggttcgtaattattagaggctctcaaattttg
agtggggtgatggacaagtctgttctgggtgatggtaaaaagcattctgtattttatacg
atattacgagattacggccctcaagaggccgctagtgctatgaatagaatggcaaaatta
tgtgctaggttcttaggtaatagaggattttctattggtattaacgatgttacacccgct
gatgatttgaagcaaaagaaggaagaactagttgaaattgcgtaccgtaagtgtgacgaa
ttgatcacattattcaataaaggtgaattagaaacacagcctggttgcaatgaagaacaa
acattggaagctaagatcggtgggcttctatctaaagttagagaagaagttggtgatgtt
tgtattaatgaattagataattggaatgcaccattgattatggccacttgtggctctaaa
ggttccacattgaatgtttctcaaatggtggctgttgttggtcagcaaattatttctggt
aatcgtgttcccgatggttttcaagatcgttctttaccacatttccctaagaattcaaaa
acacctcaatccaaaggtttcgttagaaattctttcttttcaggcttatctcctccagaa
tttctgttccatgctatttctggtcgtgaaggtttagttgacacagctgttaaaaccgca
gagactggttatatgtctcgtagattaatgaagtctttagaggatttgtcttgtcaatat
gacaatacggtcagaacttcagccaacggtattgtccaatttacatatggtggtgatggt
ttggatccattggaaatggaaggtaacgcacaaccggtcaatttcaatagaagttgggac
cacgcatacaatattactttcaataaccaagataaaggtttactaccatacgccattatg
gcaactgcaaacgaaattttgggaccattggaggaaagattggtcagatacgataatagt
ggaagtttggttaaaagaggagatttggacaaagccgaatatgtggatcagtatgatgcc
gagagagatttttaccattcattaagggaatatgttaatttgaaagccactgctttagct
aatttaagaaaatccaggggaatgttagggctactggaacctccaaccaaagaattacaa
gatatagatccagatgaaagcgtccctaataatgtcaaaacctctgtaagccagctttat
agaatcagtgaaaaatcagtaagaaagttcctagagatcgctcttttcaaataccgtaag
gcaagacttgagccaggcactgccattggtgccattggtgctcaatccattggtgaacca
ggtacacaaatgacattgaagacttttcatttcgctggtgtggcttccatgaatgttaca
ttaggtgtgcctcgtatcaaggaaattatcaatgcttccaaggttatttctacacctatt
atcaatgccgtattagtcaatgataatgatgagagggctgctagagtggttaaaggtaga
gtggagaagacactgttatctgacgtagctttctatgtccaagatgtttacaaagacaac
ttgtctttcattcaagtacgtattgatttaggtacgattgataaattacaattggagtta
accatagaggatatcgcagttgctataactagggcttctaaattgaaaatacaagcatct
gatgtcaatattatcggtaaagatcgaattgcaatcaatgtattcccggaagggtacaaa
gcaaaatcaatatctacatctacgaaagaaccaagtgagaatgatgttttttacagaatg
caacagttacgccgtgcgcttcctgatgtcgtcgttaaaggtttacctgatatatctcgt
gcggttattaatattcgcgatgacggcaagagggagttgttagttgaaggttacggcctg
cgagatgttatgtgtacagatggtgtgattggttccagaactacaactaaccatgtttta
gaagtcttttccgttctgggtatcgaagctgcaagatatagtatcgttagagaaattaac
tataccatgagtaatcacggtatgagtgtcgatccccgtcatattcaactattaggtgat
gtgatgacatataagggtgaagttttgggtattacaagattcggtttaagtaaaatgaga
gactctgttttgcagttagcgtctttcgaaaagacaacagaccatttatttgatgcagcc
ttttatatgaagaaggacgccgttgaaggtgtttctgaatgtattattttgggtcaaact
atgtcgatcggtaccggctccttcaaagtcgttaaaggtactaatatatccgaaaaggat
ctggtgcctaagccatgtctatttgaaagtctctcaaatgaggcggttttaaaatcgaac
tga
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