KEGG   Saccharomyces paradoxus: SPAR_O02880
Entry
SPAR_O02880       CDS       T08193                                 
Name
(RefSeq) Sme1
  KO
K11097  small nuclear ribonucleoprotein E
Organism
spao  Saccharomyces paradoxus
Pathway
spao03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spao00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPAR_O02880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spao03019]
    SPAR_O02880
   03041 Spliceosome [BR:spao03041]
    SPAR_O02880
   03032 DNA replication proteins [BR:spao03032]
    SPAR_O02880
Messenger RNA biogenesis [BR:spao03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     SPAR_O02880
Spliceosome [BR:spao03041]
 Complex A
  U1 snRNP components
   Sm proteins
    SPAR_O02880
  U2 snRNP components
    SPAR_O02880
 Complex B
  U1 snRNP components
    SPAR_O02880
  U4/U6.U5 tri-snRNP components
    SPAR_O02880
 Complex C
  U2 snRNP components
    SPAR_O02880
DNA replication proteins [BR:spao03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     SPAR_O02880
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 54633717
NCBI-ProteinID: XP_033769292
LinkDB
Position
XV:complement(<616292..>616576)
AA seq 94 aa
MSNKVKSKAMVPPINCIFNYLQQQTPVTIWLFEQIGIRIRGKIVGFDEFMNVVIDEAVEI
PVNSADGKEDVEKGTPLGKILLKGDNITLITSAD
NT seq 285 nt   +upstreamnt  +downstreamnt
atgtcgaacaaagttaaaagcaaggctatggtgccaccaataaattgcatattcaactac
ttacaacagcaaacaccagtaacaatatggttattcgagcaaatcggcataagaatcaga
ggtaaaatagtgggatttgatgagttcatgaatgttgtcatcgatgaagccgtggaaatt
cccgtcaatagtgccgatggcaaagaagatgtggagaagggtacacccttggggaaaatc
ctgttgaaaggtgataatatcacattaataacatcagcggattga

DBGET integrated database retrieval system