Saccharomyces paradoxus: SPAR_O03270
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Entry
SPAR_O03270 CDS
T08193
Name
(RefSeq) Ded1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
spao
Saccharomyces paradoxus
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spao03019
]
SPAR_O03270
03041 Spliceosome [BR:
spao03041
]
SPAR_O03270
03036 Chromosome and associated proteins [BR:
spao03036
]
SPAR_O03270
Enzymes [BR:
spao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SPAR_O03270
Messenger RNA biogenesis [BR:
spao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
SPAR_O03270
mRNA cycle factors
Common to processing body (P body) and stress granule
SPAR_O03270
Spliceosome [BR:
spao03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
SPAR_O03270
Chromosome and associated proteins [BR:
spao03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
SPAR_O03270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
CMS1
Utp25_C
Motif
Other DBs
NCBI-GeneID:
54633756
NCBI-ProteinID:
XP_033769331
UniProt:
A0A8B8V041
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All DBs
Position
XV:700274..702094
Genome browser
AA seq
606 aa
AA seq
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MAELSEQVQNLSINDNNENGYVPPHLRGKPRSARNNSSNYNNNNGGGYNGGRGGGSFFSN
NRRGGGYGNGGFFGGNNGGSRSNGRSGGRWVDGKHVPAPRNEKAEIALFGVPEDPNFQSS
GINFDNYDDIPVDASGKDVPEPITEFTSPPLEGLLLENIKLARFTKPTPVQKYSVPIVAN
GRDLMACAQTGSGKTGGFLFPVLSESFKTGPSPQPESQGSFYQRKAYPTAVIMAPTRELA
TQIFDEAKKFTYRSWVKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKISLA
NVKYLVLDEADRMLDMGFEPQIRHIVEDCDMTPVGERQTLMFSATFPADIQHLARDFLSD
YIFLSVGRVGSTSENITQKVLYVENQDKKSALLDLLSASTDGLTLIFVETKRMADQLTDF
LIMQNFRATAIHGDRTQSERERALAAFRSGAASLLVATAVAARGLDIPNVTHVINYDLPS
DVDDYVHRIGRTGRAGNTGLATAFFNSENSNIVKGLHEILTEANQEVPSFLKDAMMSAPG
SRSNSRRGGFGRNNNRDYRKAGGASAGGWGASRSRDSSFRGGSGWGSDSKSSGWGNSGGS
NNSSWW
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggctgaactgagcgaacaagtgcaaaatctaagcattaacgacaacaacgaaaatggt
tacgttcctcctcacttaagaggaaaaccaagaagtgccagaaacaacagcagcaactat
aataacaacaatggcggcggctacaatggtggccgtggcggtggtagtttctttagcaac
aaccgtcgtggtggtggttacggcaacggtggtttcttcggtggaaacaacggtggcagc
agatctaacggccgttctggtggtagatgggtcgatggcaaacatgttccagccccaaga
aacgaaaaggccgagatcgccctatttggtgttcccgaagatccaaatttccaatcctct
ggtatcaacttcgacaactatgacgatattccagtggacgcctctggtaaggatgttcct
gaaccaatcacagaatttacctctcctccattggaaggattgttattagaaaatatcaaa
ttggcccgcttcaccaagccaacccccgtgcaaaaatattccgtccctattgttgccaac
ggtagagatttgatggcttgtgcacaaactggttccggtaagactggtgggttcttattc
ccagtcttgtccgaatctttcaaaaccggaccatctcctcaaccagagtctcaaggctcc
ttttaccaaagaaaagcctatcctactgctgtcattatggctccaactagagagttggct
acccaaatttttgatgaagccaagaagtttacttacagatcctgggttaaagcctgcgtc
gtctatggtggttctccaatcggtaaccaactaagagaaattgagcgtggttgcgatctt
ttggtcgctactccaggtcgtttgaacgacttgttggaacgtggtaagatctctttggcc
aacgtcaagtatttggttctagatgaagctgatagaatgttggatatgggttttgaacct
caaattagacacattgtcgaagactgtgatatgactcctgtcggtgaaagacaaaccctg
atgttctcagctactttccccgctgatatccaacatttggcccgtgatttcttaagtgac
tatatctttttgtctgttggtagagttggttctacttcagaaaacattacccaaaaggtc
ttatatgtcgaaaatcaagataaaaaatcagctctattggatctattgtctgcctctaca
gacggtttgactttgatctttgtcgaaactaagagaatggccgatcaattgaccgatttc
ttgatcatgcaaaactttagagctaccgctattcatggtgaccgtacccaatctgaaaga
gaacgtgccttggccgctttcaggtctggtgcggcttctctattagttgccacagctgtt
gcagctagaggtctagatattccaaatgtcactcatgttatcaattacgatctaccaagt
gatgtcgatgattacgtccatagaattggtagaactggtcgtgccggtaacaccggtctt
gccactgcctttttcaatagtgaaaacagtaacattgtcaaaggtttgcatgaaatcttg
accgaagctaaccaagaagtcccatcattcttaaaagatgctatgatgagcgctccaggt
agcagaagcaacagtcgtagaggtggtttcggtcgtaacaacaacagagattatcgtaag
gccggaggcgctagcgcaggcggctggggcgcctcaagaagcagagatagctctttcaga
ggtggtagtggctggggtagcgattccaagtcttctggctggggtaacagcggtggttca
aacaactcttcttggtggtga
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