KEGG   Saccharomyces paradoxus: SPAR_O03300
Entry
SPAR_O03300       CDS       T08193                                 
Name
(RefSeq) Ret1
  KO
K03021  DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
Organism
spao  Saccharomyces paradoxus
Pathway
spao03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:spao00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SPAR_O03300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spao03021]
    SPAR_O03300
Enzymes [BR:spao01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SPAR_O03300
Transcription machinery [BR:spao03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     SPAR_O03300
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 PadR
Other DBs
NCBI-GeneID: 54633759
NCBI-ProteinID: XP_033769334
UniProt: A0A8B8UZZ8
LinkDB
Position
XV:complement(707367..710816)
AA seq 1149 aa
MVGATKRRKTHIHKHVKDEAFDDLLKPVYKGKKLTDEINTAQDKWHLLPAFLKVKGLVKQ
HLDSFNYFVDTDLKKIIKANQLILSDVDPEFYLKYVDIRVGKKSSSSTKDYLTPPHECRL
RDMTYSAPIYVDIEYTRGRNIIMHKDVEIGRMPIMLRSNKCILYDADESKMAKLNECPLD
PGGYFIVNGTEKVILVQEQLSKNRIIVEADEKKGIVQASVTSSTHERKSKTYVITKNGKI
YLKHNSIAEEIPIAVVLKACGILSDLEIMQLVCGNDSSYQDIFAVNLEESSKLDIYTQQQ
ALEYIGAKVKTMRRQKLTILQEGIEAIATTVIAHLTVEALDFREKALYIAMMTRRVVMAM
YNPKMIDDRDYVGNKRLELAGQLISLLFEDLFKKFNNDFKLSIDKVLKKPNRAMEYDALL
SINVHSNNITSGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKS
RKVSGPRALQPSQFGMLCTADTPEGEACGLVKNLALMTHITTDDEEEPIKKLCYVLGVED
ITLIDSASLHLNYGVYLNGTLIGSIRFPTKFVTQFRHLRRTGKVSEFISIYSNSHQMAVH
IATDGGRICRPLIIVSDGQSRVKDTHLRQLLDGELDFDDFLKLGLVEYLDVNEENDSYIA
LYEKDIVPSMTHLEIEPFTILGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQFKR
IDTLLYLMTYPQQPMVKTKTIELIDYDKLPAGQNATVAVMSYSGYDIEDALVLNKSSIDR
GFGRCETRRKTTTVLKRYANHTQDIIGGMRVDENGEPIWQHQSLGPDGLGEVGMKVQSGQ
IYINKSVPTNSADAPNPNNINVQTQYREAPVIYRGPEPSHIDQVMMSVSDNDQALIKVLL
RQNRRPELGDKFSSRHGQKGVCGIIVKQEDMPFNDQGIVPDIIMNPHGFPSRMTVGKMIE
LISGKAGVLNGTLEYGTCFGGSKLEEMSKILVDQGFNYSGKDMLYSGITGECLQAYIFFG
PIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLL
ERLMISSDAFEVDVCDKCGLMGYSGWCTTCKSAENIIKMTIPYAAKLLFQELLSMNIAPR
LRLEDIFQQ
NT seq 3450 nt   +upstreamnt  +downstreamnt
atggttggtgcgacgaaaagacggaaaactcatatccataaacacgtgaaagacgaggca
tttgatgatttactgaaaccagtgtataaaggtaagaaactaactgatgagatcaatacc
gctcaagataagtggcaccttttgcctgcattcttgaaggttaagggtttggtgaagcaa
catcttgactcatttaactatttcgttgatacagatttaaaaaaaattataaaagcaaat
caattaattttaagcgatgtcgatccagagttttatctaaagtacgtcgatatcagagtg
ggtaagaagtcctcttcttcgaccaaagactacttgacaccacctcatgagtgtagactt
agagatatgacatactctgcaccaatttacgtggatatagaatataccagaggtagaaac
attattatgcataaagacgtggaaatcggtaggatgccgatcatgctaagatccaataaa
tgtatcctatatgatgctgatgaatcgaaaatggccaaattaaatgagtgcccgttagat
cctggtggttactttattgttaacggtacagaaaaagtaattcttgttcaagaacaatta
tccaagaatcgtattattgtggaagcagatgagaagaagggtatcgttcaggcatcagtc
acttcatctacccacgaaagaaaatccaagacttatgtcatcaccaagaatggtaaaatc
tatttgaagcataactccatcgctgaagaaatccctattgctgttgttcttaaagcttgt
ggtattttatctgatttggaaatcatgcaattggtttgtggtaatgatagtagctaccaa
gatattttcgccgttaatttggaagaatcctcgaaattagatatttatacacaacagcaa
gctttagagtatatcggcgccaaagtaaagacaatgagaagacaaaaattgacgatactg
caagaaggtatagaagccattgctactacagtcattgcacacttgaccgtagaggcgctc
gactttagggaaaaggctttatatattgctatgatgacacgcagggtggtaatggcaatg
tataaccctaagatgattgacgatagagattacgttggtaataagcgtcttgaattagcc
ggccaactgatttccttattgtttgaagatttgttcaaaaagtttaataatgattttaaa
ctaagcattgataaagtcttgaaaaaaccaaatagggccatggaatatgatgcattattg
tcaattaacgttcattcaaataacattaccagtggactgaacagagctatttcaacaggt
aactggtcccttaaaagatttaagatggaaagagcgggtgttacacacgttctttctaga
ttatcttacatttctgcattgggtatgatgacaagaatttcatctcagtttgaaaaatca
agaaaagtttccggtccaagagcattacaaccttctcaattcggtatgctttgtaccgca
gatactccagaaggtgaagcctgtggcctagtgaaaaatttagcattaatgactcatatc
actacagatgacgaagaagaacctataaagaaattatgttacgttcttggtgtagaagac
ataactttgattgacagtgcatccttgcatctaaactatggtgtttatttaaatggtact
ttaattggttcaatcagatttccaacaaaatttgttactcaattcagacatctaagaaga
acaggtaaagtctcggagttcatctcaatttattcgaattctcaccagatggcagttcat
attgctactgatggtggtagaatttgtaggccattaataattgtttctgacggtcaatct
cgtgtgaaagatactcatttacgtcaactactagacggtgagttagattttgatgacttt
ttgaagcttgggttggtggaatatttagatgtcaatgaagaaaacgattcttacattgca
ttgtatgaaaaggacatcgttccttcgatgacacatttagaaattgagccattcaccatt
ttaggtgccgttgctggtttaattccatatccacatcataaccaatcccctcgtaacaca
tatcaatgtgcgatgggtaagcaagcaatcggtgcaatcgcctataatcagttcaaaagg
atagatacgttattatacttgatgacttatccgcaacaaccaatggtgaaaaccaaaaca
atcgaattgatcgattatgataaattgcctgctggtcaaaatgctacggttgctgtcatg
tcctattctggttatgatattgaagatgctttggttttaaataagtcatccatagataga
ggttttggtcgttgtgaaactcgtagaaagacaaccaccgttttgaaaagatatgcgaac
catacccaagatatcatcggtggtatgcgtgtcgacgaaaatggagaacctatatggcaa
catcaatcccttggccctgacggtctaggtgaggtgggtatgaaggttcaaagtggccaa
atctatatcaacaaatcagttccaactaattccgcagacgcgccgaacccaaacaatata
aacgtccaaactcaatatagggaagctccggtgatatatagaggtccagaaccttcccat
attgaccaagttatgatgtccgtttcagataatgaccaagctttgatcaaagttctgtta
agacaaaacagaagacctgaattaggtgataaattttcttctagacatggtcaaaaaggt
gtttgtggtattattgtaaagcaagaagacatgcctttcaacgatcaaggtatagttcca
gacattatcatgaatcctcacggtttcccatctcgtatgactgtgggtaaaatgatcgaa
ctaatatcgggtaaagctggtgtgctaaatggcactttggaatacggtacatgttttggt
ggttctaaacttgaagagatgtctaagattttggttgatcaaggtttcaactattctggt
aaggatatgttatattcaggtataacaggtgaatgtttacaagcctatatcttttttggc
ccaatttactaccaaaaattgaagcatatggttttagataagatgcacgcaagagctcgt
ggtccaagggctgttttgacacgtcaacctactgagggtagatccagagatggtggtctg
aggttgggtgaaatggaaagagattgtgtaattgcctatggtgcttctcaactgttgtta
gaaaggttgatgattagttcagacgcttttgaagttgatgtctgtgataagtgtggatta
atgggctatagtggttggtgtaccacctgcaaaagtgcagaaaatattattaaaatgact
attccatatgccgcaaaactgctattccaggaattattatctatgaacattgccccaaga
ttaagattggaagatatctttcagcaataa

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