KEGG   Saccharomyces paradoxus: SPAR_O04190
Entry
SPAR_O04190       CDS       T08193                                 
Name
(RefSeq) Snu66
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
spao  Saccharomyces paradoxus
Pathway
spao03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spao00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPAR_O04190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spao03041]
    SPAR_O04190
   04121 Ubiquitin system [BR:spao04121]
    SPAR_O04190
Spliceosome [BR:spao03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    SPAR_O04190
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    SPAR_O04190
Ubiquitin system [BR:spao04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    SPAR_O04190
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 54633848
NCBI-ProteinID: XP_033769423
UniProt: A0A8B8V0C6
LinkDB
Position
XV:complement(872895..874661)
AA seq 588 aa
MNKKESLSIEETNEIREKLGLKPIPVLQEENAGRKESLSIQETNELRASLGLKLIPPQQN
QNVSPPTIHTTAEVDILREKITKLQKANIPLRMLHLLEETGVNDDSSWLENLNAITALDE
SKASSRLLPRKGATKEDEDIDLHNVEVSYNIETLSAKKDTILTLKESSIFDETDSVDVLE
NEKAAGESTEREGLRLRQMNKDRRQKKKILNVSSLDIEEEEKEEHSLANTHLIIGAEQGI
AKAPKGMIAKLPTGKVKVNFDGANDILDEDGGDYKPLKIKKRRIKDPKSTKARKLKIAHK
MDVVKLVDEDESFSWMNEEQPVTIMNPRSSSKNELKAPEDLAIEIEKTRNEEKRRTENIL
KMRENSNNIIVDEKVTFLDTLDMGLPEGNTTANKLKVDDEGEKNVGDVTGQHFKEASGNN
KLTESVNTEPNNEGDIEDAPDFFSGLASALGFLRKKSVLTPGNAGLKAEKGTNDSESLRK
GVRNKEPTDTTSYTKDGLHGLKQSEASNSPNNISSNQRKRQSHYDPEIQLVYRDEKGNQL
TTKEAYKKLSQKFHGTKSNKKKRAKMQSRIEARKNAFENDNLFEFDNS
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgaacaaaaaagaaagcctttctatagaggagacaaatgaaataagggaaaagctgggt
ttaaaacctattccagttcttcaagaggaaaatgcaggccgcaaagaatctttgtcaatc
caagagacgaacgaattaagggcgtcccttggcctaaaacttattccacctcaacaaaat
cagaatgtttctcccccaactatacatactactgccgaggtcgacatacttagagagaag
ataacaaagcttcaaaaggctaacatacctttacgaatgctgcacctactcgaagaaact
ggtgtcaatgatgacagttcatggctggaaaacctgaatgcaattactgccctggatgaa
agcaaagcttccagcaggttactgccacgtaagggtgcaacaaaagaagacgaagatatt
gatctgcataatgttgaagtatcctataatatcgagacccttagcgcaaagaaagacacg
atcctaactttaaaagaaagcagtatttttgatgagactgattctgttgacgtattagag
aatgaaaaagctgccggggaaagcactgaaagagagggactacgattacgacaaatgaat
aaagatagaagacaaaaaaaaaaaattttaaatgtatctagcttagacattgaagaagaa
gagaaagaggaacattcgcttgcgaatactcatttaattattggagcagagcaagggatc
gcgaaggcaccaaagggcatgattgcaaaactaccaacaggaaaagttaaggtgaacttc
gatggcgcaaatgatattttagatgaagacggtggagactataaaccattaaaaataaaa
aaacgcagaatcaaggatccaaaatctactaaagctaggaagttaaaaattgcccataag
atggatgttgttaagttggtggatgaagatgaaagtttttcctggatgaacgaagaacag
ccagtgacaataatgaatccaaggtcaagttcgaagaacgaattaaaagccccggaggac
cttgccatagaaattgaaaagacaagaaatgaagagaagcgacgcactgaaaacatcctg
aaaatgcgtgagaattccaataatattatcgttgacgaaaaggtaacttttttggatact
ttggatatgggtctccctgaaggaaatactactgcaaataaattgaaagtggatgatgaa
ggagagaaaaatgtcggggatgttactggccaacattttaaagaagcaagtggtaacaac
aaacttactgaatcggttaatactgaaccaaacaatgaaggggatattgaagatgcgcca
gactttttctctggtcttgcatcagcactagggtttcttcggaagaagagtgttcttacc
ccaggaaatgccggtttgaaagcagaaaagggtactaatgacagcgaatcactccgaaag
ggtgtccggaataaagagcccaccgacactactagttacacaaaggatgggctacacgga
ctgaaacaatccgaagccagcaattctccaaataatatatcaagtaaccagcgaaaaagg
caaagtcattatgatcctgaaatacaacttgtttacagagacgaaaagggaaatcaactg
actactaaagaggcgtataaaaaattgtcacagaaatttcatggcacaaaaagcaacaag
aaaaagagagcaaaaatgcaatctagaattgaggcaaggaaaaatgcctttgagaatgat
aatttattcgagtttgataatagttaa

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