Saccharomyces paradoxus: SPAR_O04620
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Entry
SPAR_O04620 CDS
T08193
Name
(RefSeq) Vts1
KO
K27407
RNA-binding protein VTS1
Organism
spao
Saccharomyces paradoxus
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spao03019
]
SPAR_O04620
04131 Membrane trafficking [BR:
spao04131
]
SPAR_O04620
Messenger RNA biogenesis [BR:
spao03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
SPAR_O04620
Membrane trafficking [BR:
spao04131
]
SNARE
SNARE associated proteins
Others
SPAR_O04620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
DUF4304
Motif
Other DBs
NCBI-GeneID:
54633891
NCBI-ProteinID:
XP_033769466
UniProt:
A0A8B8V0H7
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All DBs
Position
XV:984673..986259
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AA seq
528 aa
AA seq
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MKHPYEEFPTGSKSPYNMSRGAHPGAVLLSPQSSAINNNNSGSNNSNNQGNSSVTANVLS
PQSHSMSLNDMLDQQSFMLDTTGTRAQPLQQQQQQQQQQQQQQQASLPSLNIQTISSTAA
GSAIVSPMMQSPKAMQSTLSSTSMYLDSFQRSSNNILGLPSQGGSIPLPQSRQSQHQSQP
QPQKNDPNIGTNFSQDINQLCSWISMLNSSQQNTVMDNILSILNDDVLKYTKLKLDTLTS
TPFISPPLPAIASPIPNRDDTQILNIDSVFSSSPITNEPENADNLLYQNWSPQPHSIPIT
QPVYDNITDPSQRSKSAEPHVNSSPNLIPGQKQFNNGSSTKYKKLSSDNPNYLSHSLSTS
HSFFQPKKRSNMGNEYSSHHHHSLHHPLHNTTSYFSSTPRPSGTESNKSNQNVFNNINTH
PNAGATSATSTSTSSTGNTPLSSNSSMNPKSLTDPKLLKNIPMWLKSLRLHKYSDALSGT
PWIELIYLDDETLEKKGVLALGARRKLLKAFGIVIDYKERDLIDRSAY
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatccgtatgaggaattccctacaggttccaagtcaccatataacatgtctaga
ggagctcatcctggtgccgttttgctttcgccacaatcaagtgctataaacaacaacaat
tcgggcagcaataatagtaataaccagggcaattcatctgtgaccgcgaatgttttgtcc
cctcaatcccacagtatgtcactcaatgacatgcttgatcagcaatcctttatgttagac
actacggggactagggctcagccgctccagcagcagcagcaacaacaacagcagcagcag
cagcagcagcaggcgtcattgccttcccttaatattcaaacaatatcgtccacagcagct
ggttctgctatcgtttcccctatgatgcaatctccaaaagcaatgcaatctactttatct
tcaacgtctatgtatttggattcatttcagaggtcttcaaataatatcctgggtcttcca
tctcagggtggttcaattcccttaccgcaatcccgtcaatcgcaacaccagtcgcaaccg
caaccccaaaagaatgacccaaacataggcacgaacttcagccaagacattaaccaattg
tgttcttggatatccatgctgaatagcagccaacaaaatactgtaatggataatatactc
tccatcctgaatgatgatgttttgaagtatactaagttaaaattggacactttgacaagc
actccttttatctcgccaccgctacctgcaatagcatcacctataccaaatagggatgac
acgcaaattttgaatattgactcagtcttttcttctagtccaattaccaatgaacctgaa
aatgccgataatttgttgtaccaaaattggtctcctcagccccattctataccaattact
caacccgtttatgataacatcacagaccctagtcaaaggtccaagtcggctgaacctcat
gtcaattcaagcccaaatctcattcccggtcagaaacaatttaacaacggtagtagtact
aaatataaaaagttgtcatcagataatccaaactatctatcgcactccctttcaacttcc
cattcctttttccaaccaaagaaaagatctaacatgggaaatgagtacagttctcatcac
catcattcattgcatcatcctctgcataatacaacctcatatttttccagcacgccaaga
ccatccggaactgaatctaataagtccaatcagaacgtgttcaacaatatcaatacgcat
cccaatgctggtgctacaagtgccacatcgacatccacatcgtctaccggaaacacacct
ttatcgagtaattcttcaatgaatccaaagagcttgacagaccccaagttattaaagaat
atacccatgtggctgaaatcgttaagactacataagtattcagacgctttgagtggaacc
ccatggattgaattgatttacttagacgacgagactttggaaaaaaaaggcgtgctcgcc
ttgggtgcaaggagaaaattgttaaaggcttttggaatcgttattgattacaaagaacgt
gatttaattgatagatctgcttattaa
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