Saccharomyces paradoxus: SPAR_P01490
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Entry
SPAR_P01490 CDS
T08193
Name
(RefSeq) Tfb2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
spao
Saccharomyces paradoxus
Pathway
spao03022
Basal transcription factors
spao03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SPAR_P01490
09124 Replication and repair
03420 Nucleotide excision repair
SPAR_P01490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spao03021
]
SPAR_P01490
03400 DNA repair and recombination proteins [BR:
spao03400
]
SPAR_P01490
Transcription machinery [BR:
spao03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SPAR_P01490
DNA repair and recombination proteins [BR:
spao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SPAR_P01490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
bPH_7
Motif
Other DBs
NCBI-GeneID:
54634091
NCBI-ProteinID:
XP_033769646
UniProt:
A0A8B8V100
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All DBs
Position
XVI:complement(304012..305553)
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AA seq
513 aa
AA seq
DB search
MSDYSLKHSVTQYLEEIPQQVQNRLYTSPATCLAIYRILPPLAKFFIMAMVFNENEVPLL
DLDKWVNSNGKLQFQDAIKSMKSLHLLIPNKSSGTLMINLNPTFKISLRNALTGGEVQNS
FGIVVEDNVVSLDLLDEYSANKWETILHFMVGTPLAKIPSEKVLNLLKHSKLMEEVNSTG
EFKITNEGFQFLLQEINSQLWTLLLQYLKMIETSKMDLVDVLHFIFMLGALEVGKAYKID
ALSETQRIMLQDMRDYGLVFQKHSNDSIFYPTKLALMLTSDTKTIRSASNAMDSVLRQNR
EEPSVNEDGANGKSTTDITTSDDLNKAGLKNQDIPDGSLIVETNFKIYSYSNSPLQIAVL
SLFVHLKARFVNMVLGQITRESIRRALTNGITADQIIAYLETHAHPQMRRLAEEKLEKKL
ELDPNCKEPLQVLPPTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLLSQYAQDIGV
LLWKDDKKKKFFISKEGNSQVLDFAKRKLKKKQ
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgagtgactattccttgaagcattcggtcactcaatatttggaagaaattcctcagcaa
gtgcaaaataggctttatacctcaccagccacatgtctggctatctatagaattttacca
ccattagctaaattttttattatggcaatggtttttaacgaaaatgaagtacctctgtta
gatttggataaatgggttaattctaatggtaaattgcagtttcaagatgcaataaaatcg
atgaagtctttgcatcttcttataccaaacaaatcttctggtactttgatgatcaacctg
aacccgacgttcaaaattagcctgagaaacgcattaacgggtggggaagttcaaaattcg
tttggtattgttgtagaggataacgtagttagcttagacttgttggatgaatattcagca
aataaatgggaaacaatattacatttcatggttggcactccactcgctaaaatcccatct
gaaaaggtactaaaccttttgaaacacagtaaacttatggaagaggtaaactccactgga
gagttcaaaatcactaatgagggtttccaatttcttttacaagaaatcaactcccaatta
tggactttattattacaatacttaaaaatgattgaaacatctaaaatggatttggtcgat
gtcctgcattttatcttcatgttaggcgcactagaagttggtaaggcttacaaaatcgat
gcactaagcgaaacacaaaggattatgttacaagatatgagagactatggtttggtattc
cagaagcattcaaatgatagcatcttttatccaacaaaattagctttaatgctaacctcc
gataccaaaacaatcagatctgcctccaatgcgatggatagtgtactgagacagaataga
gaagagccgtcagtaaatgaagatggtgccaacggtaaatctacaacagatatcactaca
tcagatgatttgaacaaagctggtctaaaaaatcaagatatacccgatggttcgttaatt
gtagaaacaaattttaagatttattcatattctaattcacctttgcaaattgcggttttg
tctctttttgtccatttaaaggcaagatttgtgaatatggtattgggccaaataacaagg
gaatctataagaagagcactgactaatggtatcactgcagatcaaatcattgcctatttg
gagacgcacgcacatccccaaatgagaaggttggcagaagaaaagctggaaaagaaatta
gagctggaccccaactgtaaggagcctttacaagttttgcctcctaccgtcgtggatcaa
atcagattatggcaattagagttagatagagtcataacatatgagggttcgctttattct
gattttgagactagtcaagaatacaatttactgagtcaatatgctcaagatattggcgtt
ctgttatggaaagatgacaaaaagaagaaatttttcatttcgaaggaaggtaattctcaa
gtacttgatttcgctaaaagaaaattgaaaaagaaacaataa
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