KEGG   Saccharomyces paradoxus: SPAR_P02020
Entry
SPAR_P02020       CDS       T08193                                 
Name
(RefSeq) Vps28
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
spao  Saccharomyces paradoxus
Pathway
spao04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:spao00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    SPAR_P02020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:spao04131]
    SPAR_P02020
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spao04147]
    SPAR_P02020
Membrane trafficking [BR:spao04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    SPAR_P02020
Exosome [BR:spao04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   SPAR_P02020
  Exosomal proteins of other body fluids (saliva and urine)
   SPAR_P02020
  Exosomal proteins of colorectal cancer cells
   SPAR_P02020
  Exosomal proteins of bladder cancer cells
   SPAR_P02020
SSDB
Motif
Pfam: VPS28 DUF3114 DUF3417
Other DBs
NCBI-GeneID: 54634144
NCBI-ProteinID: XP_033769699
UniProt: A0A8B8V107
LinkDB
Position
XVI:412679..413407
AA seq 242 aa
MPRQDIKLKQNQDISQLFHDEIPLFDNSITSKDKEVIETLSEIYSIIITLDHVEKAYLKD
SINDTQYTNTVDKLLKQFKVYLNSQNKDEINKHFQSIEAFSDKYNITASNAITRLERGIP
ITAEHAISTATLTPSGDNEQGSSSDKKFNAKYVAEATGNFITVMDALKLNYNAKDQLHPL
LAELLISINRVTRDDFENRSKLIDWIVRINKLSIGDTLTETQIRELLFDLDLAYKSFYAL
LD
NT seq 729 nt   +upstreamnt  +downstreamnt
atgccaagacaagatataaaattgaagcaaaaccaggatatttcccaattattccatgat
gaaatacccttattcgacaactctataacttcaaaggataaagaagtcattgagacgtta
tctgaaatatattctattataatcacgttagaccacgtagagaaggcatacctaaaggac
tccataaacgacacccaatataccaatactgttgacaaattactgaaacagttcaaagtc
tacttaaattctcaaaataaagacgaaattaacaagcatttccaatccattgaagcattc
tccgataaatacaacatcacagcctcaaacgcaataacaagattggaaaggggcatacca
attacagcagaacatgcgatatccactgccacgttgaccccatccggtgataatgaacaa
ggttcttctagcgacaaaaagttcaatgctaaatacgtcgctgaagccaccggtaatttc
atcactgtgatggatgctttgaaactgaattataatgcaaaagatcaattacatccttta
ttggcggaactgctaatcagtataaatcgtgtcaccagagatgattttgagaatagatca
aaactcatcgattggattgtcagaataaacaagctatcaattggtgacactttgaccgaa
acacaaataagagaactactgtttgatttggacctagcctataaaagtttttatgcttta
ttagattag

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