Saccharomyces paradoxus: SPAR_P02020
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Entry
SPAR_P02020 CDS
T08193
Name
(RefSeq) Vps28
KO
K12184
ESCRT-I complex subunit VPS28
Organism
spao
Saccharomyces paradoxus
Pathway
spao04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
SPAR_P02020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spao04131
]
SPAR_P02020
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spao04147
]
SPAR_P02020
Membrane trafficking [BR:
spao04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
SPAR_P02020
Exosome [BR:
spao04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SPAR_P02020
Exosomal proteins of other body fluids (saliva and urine)
SPAR_P02020
Exosomal proteins of colorectal cancer cells
SPAR_P02020
Exosomal proteins of bladder cancer cells
SPAR_P02020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
DUF3114
DUF3417
Motif
Other DBs
NCBI-GeneID:
54634144
NCBI-ProteinID:
XP_033769699
UniProt:
A0A8B8V107
LinkDB
All DBs
Position
XVI:412679..413407
Genome browser
AA seq
242 aa
AA seq
DB search
MPRQDIKLKQNQDISQLFHDEIPLFDNSITSKDKEVIETLSEIYSIIITLDHVEKAYLKD
SINDTQYTNTVDKLLKQFKVYLNSQNKDEINKHFQSIEAFSDKYNITASNAITRLERGIP
ITAEHAISTATLTPSGDNEQGSSSDKKFNAKYVAEATGNFITVMDALKLNYNAKDQLHPL
LAELLISINRVTRDDFENRSKLIDWIVRINKLSIGDTLTETQIRELLFDLDLAYKSFYAL
LD
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgccaagacaagatataaaattgaagcaaaaccaggatatttcccaattattccatgat
gaaatacccttattcgacaactctataacttcaaaggataaagaagtcattgagacgtta
tctgaaatatattctattataatcacgttagaccacgtagagaaggcatacctaaaggac
tccataaacgacacccaatataccaatactgttgacaaattactgaaacagttcaaagtc
tacttaaattctcaaaataaagacgaaattaacaagcatttccaatccattgaagcattc
tccgataaatacaacatcacagcctcaaacgcaataacaagattggaaaggggcatacca
attacagcagaacatgcgatatccactgccacgttgaccccatccggtgataatgaacaa
ggttcttctagcgacaaaaagttcaatgctaaatacgtcgctgaagccaccggtaatttc
atcactgtgatggatgctttgaaactgaattataatgcaaaagatcaattacatccttta
ttggcggaactgctaatcagtataaatcgtgtcaccagagatgattttgagaatagatca
aaactcatcgattggattgtcagaataaacaagctatcaattggtgacactttgaccgaa
acacaaataagagaactactgtttgatttggacctagcctataaaagtttttatgcttta
ttagattag
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