KEGG   Saccharomyces paradoxus: SPAR_P02410
Entry
SPAR_P02410       CDS       T08193                                 
Name
(RefSeq) Rad1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
spao  Saccharomyces paradoxus
Pathway
spao03420  Nucleotide excision repair
spao03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:spao00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SPAR_P02410
   03460 Fanconi anemia pathway
    SPAR_P02410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spao03032]
    SPAR_P02410
   03400 DNA repair and recombination proteins [BR:spao03400]
    SPAR_P02410
DNA replication proteins [BR:spao03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    SPAR_P02410
DNA repair and recombination proteins [BR:spao03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     SPAR_P02410
SSDB
Motif
Pfam: ERCC4
Other DBs
NCBI-GeneID: 54634183
NCBI-ProteinID: XP_033769738
UniProt: A0A8B8V184
LinkDB
Position
XVI:483409..486732
AA seq 1107 aa
MSQLFYQGDSDDELQEELTRQTTQASQSSKNRDKDEVSESNHFSVVENEGNKLLDEDTVL
YPLIPNESDDIETSKPNINDIRPVDIQLTLPLPFQQKVVENSLIAEDSLVIMGKGLGLLD
IVANLLHVLATPTSINGQLKRALVLVLNAKPIDNVRIREALEELSWFTNTEKGKPDATME
SDDELFERPFNVVTADSLSVEKRRKLYISGGILSVTSRILIVDLLSGIVHPNRVTGMLVL
NADSLRHNSNESFILEIYRSKNTWGFIKAFSEAAETFVMEFSPLRTKMKELRLKNVLLWP
RFRVEVSSCLNATNKTSHNKVIEVKVSLTNSMSQIQFGLMECLKKCIAELSRKNPELALE
WWNIENVLDINFIRSIDSVMVPNWHRISYESKQLVKDIRFLRRLLKMLVTSDAVDFFGEI
QLSLDANKPSVSRKYSESPWLLVDEAQLVISYAKKRIFYNNEYSLEENPKWEQLIHILDD
IAHERINNSFQGPTLVACSDNLTCLELAKILNASNKKRGMRQVLLNKLKWYRKQREETKK
LVKEVQSQDTFPENATLNVSSTFSKEQVTTKRRRTRGASQVAAVEKLRNAGANVDMEEVF
EGRKLAEEIKKESDNLNDSQEENAGINDEENAANDSKIFEMQEQENEIVTDDEDAEVDNG
ELEYGDDLPQHITTHFNKDLWAEHCNEYGYVDRQDEVLISTFKSLNDNCSLQEMMPSYII
MFEPDLSFIRQIEVYKAIVKDLRPKVYFMYYGESIEEQSHLTAIKREKDAFTKLIRENAN
LSHHFETNEDLSHYKNLAERKLKLSKLRKSKTRNAGGQQGFHNLTQDVVIVDTREFNASL
PGLLYRYGIRVIPCMLTVGDYVITPDICLERKSISDLIGSLQNNRLANQCKKMLKYYAYP
TLLIEFDEGQSFSLEPFSERRNYKNKDISTVHPISSKLSQDEIQLKLAKLVLRFPTLKII
WSSSPLQTVNIILELKLGREQPDPSNAVILGTNKTRPHSNSTAKGLRDGDNEFKFQRLLN
VPGVSKVDYFNLRKKIKSYNKLQKLSWNEINELINDEDLTDRIYYFLRTEKEEQEQEMTD
ENLELRDKATDNNVFDDYGDDILEAPM
NT seq 3324 nt   +upstreamnt  +downstreamnt
atgtctcagttgttttatcaaggtgactccgatgatgagctacaggaggaacttactagg
cagactactcaagcatctcaaagttctaaaaaccgggataaagatgaagtcagcgaatcc
aatcatttcagcgtagtggaaaatgagggcaacaagcttttagatgaagatacggtgttg
tacccactgatacctaacgagtcagatgatatagaaacgtctaagcccaatatcaatgat
attaggccagttgatattcaattgactttaccattgccgtttcagcaaaaggtagtagag
aactcattgattgccgaagattcattggttataatgggtaaagggctaggcttgctcgat
attgttgccaatttattgcatgttttagctacaccgacatccattaacggacaactaaag
cgagcgctggtcttagtgctgaatgcaaaacccatagataatgtaaggatcagggaagcc
ttagaagagctatcgtggttcaccaatactgaaaagggcaaacccgacgctactatggag
agcgatgatgaactttttgaaaggcctttcaacgtagttactgcggactccctgagtgtt
gaaaagagaagaaaactgtatatttcaggcggaatcttgagcgtcacttctagaattctc
atcgtggatctcttatccggtattgttcacccgaatagggttaccggtatgctggtactg
aatgcagactcacttcgacataattcgaatgaatcgtttatattagagatttacaggtcc
aaaaatacttggggttttattaaagccttttctgaagcggcagagacgttcgttatggaa
ttctcacctctcaggacgaaaatgaaagaattacggctgaagaacgttttactatggccg
agattcagggtggaggtctcttcttgtttgaatgcgaccaataagacttcacacaacaaa
gtcattgaagtcaaggtgtccctaacaaattctatgtctcaaattcagtttgggttgatg
gaatgtttgaaaaaatgtattgctgaattgagtagaaaaaatcccgaattagctctggag
tggtggaatatagaaaatgtcctggatataaactttatcaggtcgattgactcggtgatg
gtaccgaactggcacaggatttcttatgaatcaaaacaactggttaaggatataagattc
ctacgccgccttttgaagatgctcgttacttcagacgctgttgatttttttggagagatc
caattaagtttggatgccaataaaccgtcagtatcccgaaaatacagcgaatcaccatgg
ctattggtcgatgaggcacaattggtgatatcatatgcgaagaaaagaattttttacaat
aacgaatactctttagaagaaaatccaaaatgggaacaacttattcatatattagatgat
attgcacatgagagaataaacaacagctttcaagggcctactttagttgcttgttccgac
aacctcacatgtttagaactagcaaaaatcttgaatgcttctaataaaaagagaggaatg
cgtcaggtgcttctgaataagttgaaatggtacagaaaacaaagggaagaaacgaaaaaa
ttggtcaaagaagttcaaagccaggacacttttccagagaatgcaacattgaacgttagc
tcgacattttctaaagaacaagtgactacgaaaagaagaaggacaagaggtgcttcacaa
gttgcagctgttgaaaagctgaggaatgcaggtgccaacgtagatatggaggaagtgttc
gaaggtcgcaagttagccgaagaaattaaaaaggaaagcgacaatttgaatgacagtcag
gaagaaaatgctggcataaatgatgaagaaaacgcggcaaacgactcaaagattttcgaa
atgcaagaacaggaaaacgaaattgttactgatgatgaggacgctgaggttgacaacgga
gaattagaatatggggacgatcttccacagcacattacgactcacttcaataaagattta
tgggcagaacattgtaatgagtatggatatgttgatcgtcaggacgaagttttaatttct
acttttaaaagtctcaatgacaattgctcattgcaggagatgatgccctcttacattata
atgtttgaaccggatttatcttttattaggcaaattgaagtttataaggctatagtgaag
gatttgcgaccaaaggtatacttcatgtactacggtgagagtattgaagagcaaagtcat
ttgacggctataaagagggaaaaagacgctttcacaaagttaattagagagaatgcaaat
ctgtcccatcactttgaaacaaatgaagatctttctcattacaaaaatttagctgaaaga
aagttgaaactttcaaaattacgaaaatccaaaaccagaaatgcaggaggccaacaagga
ttccataatcttactcaagatgttgtcattgtagatacacgtgagtttaatgcttcattg
ccaggtttactctatcgatatggtataagggttattccttgtatgttaacggtcggcgat
tatgtgataaccccggatatttgtctcgaaagaaaatcaatttccgatttaattgggtca
ttacagaataacagattagccaatcaatgtaaaaaaatgctaaaatattatgcatatccg
acgctgttaattgagtttgacgaaggacagtcattttctttagaaccttttagtgaacgt
agaaattacaagaataaagacatctcaaccgttcaccctatatcaagcaagttatcccag
gatgaaattcaattaaaactagccaaactggtattgagatttcccactctaaaaatcata
tggtcttcctctcccctgcaaacagtgaatataattctagagttgaaattagggcgtgaa
caacctgaccctagtaacgcagttatactaggaacaaataaaactagaccgcattctaat
agcactgcaaagggcttaagagatggtgataatgagtttaaattccaaagattgttgaac
gttcctggcgtgtcaaaggttgattatttcaatcttcgcaaaaagatcaaaagctacaat
aagcttcaaaagctttcatggaacgagattaatgaacttatcaatgacgaagatttgacg
gatagaatatattacttcttgaggacagaaaaagaagaacaagaacaagagatgacagat
gagaatcttgaattgcgcgataaggcaaccgataataacgtttttgatgactatggtgat
gacattttggaagcgcctatgtaa

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