KEGG   Saccharomyces paradoxus: SPAR_P03270
Entry
SPAR_P03270       CDS       T08193                                 
Name
(RefSeq) Not5
  KO
K12580  CCR4-NOT transcription complex subunit 3
Organism
spao  Saccharomyces paradoxus
Pathway
spao03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:spao00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SPAR_P03270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spao03019]
    SPAR_P03270
Messenger RNA biogenesis [BR:spao03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SPAR_P03270
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     SPAR_P03270
SSDB
Motif
Pfam: Not3 NOT2_3_5_C ATG17_like NACHT
Other DBs
NCBI-GeneID: 54634269
NCBI-ProteinID: XP_033769824
UniProt: A0A8B8V1D3
LinkDB
Position
XVI:<667345..>669030
AA seq 561 aa
MSQRKLQQDIDKLLKKVKEGIEDFDDIYEKFQSTDPSNSSHREKLESDLKREIKKLQKHR
DQIKTWLSKEDVKDKQSVLMTNRRLIENGMERFKSVEKLMKTKQFSKEALTNPDIIKDPK
ELKKRDQVLFIHDCLDELQKQLEQYEAQENEEQTERHEFHIANLENILKKLQNNEMDPDP
VEEFQDDIKYYVENNDDPDFIEYDTIYEDMGCEIQPSSSNNEAPKEANNQSSSLSSIRSS
KKQERSPKKKAPQRDASIADRAVTPVAPAAESASQSISSTPTPLLADTPLHTVKDDSIKF
DNSIPGTPATNVSMKKKESENDSEQQLNFPPDRTDEIQKTIQQDIETNAAFQNPLFNDEL
KYWLDSKRYLMQPLQEMSPKMVSQLESSLLNCPDSLDADSPCLYTKPLSLPHPTSIFFPS
EPIRFVYPYDVPLNLTNNENDTDDKFGKDGKAKSKKHDDIYSRTSLARIFMKFDLDTLFF
IFYHYQGSYEQFLAARELFKNRNWLFNRVDRCWYYKEIEKLPPGMGKSEEESWRYFDYKK
SWLARRCGNDFVYNEEDFEKL
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgtctcaaaggaagctacaacaggatattgataagcttttgaagaaagtaaaggaagga
attgaagatttcgatgacatatatgaaaaatttcaatcaacagacccttccaattcttcg
catagagaaaagctggaatctgacctgaaaagagaaatcaagaagctgcaaaaacataga
gaccaaataaaaacatggctcagcaaagaagatgtaaaggataaacagagtgtcttgatg
actaataggaggttgatcgaaaatggcatggaaagattcaagtctgtggagaagttaatg
aagacaaaacagttttcaaaggaggctttaacaaatccagatataattaaggatcctaaa
gaactcaaaaagagagatcaagtcttatttattcatgactgtttagatgaactacaaaag
caattagaacagtatgaggctcaagagaatgaggaacaaacagaaaggcacgaatttcac
atcgccaacctagagaatattttgaagaaacttcaaaataatgaaatggacccagatccc
gtggaagaattccaagacgatataaagtactatgtagagaataatgatgatcccgatttc
attgaatacgatacaatttacgaggacatgggttgcgaaatacaaccttcgtcaagtaac
aatgaagctccaaaagaagcaaacaatcaatcttcttctttatccagcattcgttcatcg
aaaaaacaagaacgttctccaaagaagaaagccccacagagagatgcttctatagcagat
agggcggtgacaccagtggcgcctgctgcagagtcagcctcgcaatctatatcttctacg
ccaacacctctgttagctgatacgccattgcatacagtgaaagatgactcaataaagttc
gataattctatccctggtacaccggctaccaatgtgtccatgaaaaagaaggaatcagaa
aacgactcagagcaacaacttaatttcccaccggatagaacagatgaaatccaaaaaaca
atccagcaagatatagagacgaatgctgctttccaaaatcctttattcaacgacgaattg
aaatactggttggactcgaaaaggtatttgatgcaaccacttcaagaaatgtcaccaaag
atggtatcgcaattagaatcctcgctgttgaattgtccagattctctggatgcagattca
ccatgtctctacaccaaaccattatctttacctcacccaacgtctatctttttccccagt
gaaccaatccgatttgtttatccgtacgatgtacctttaaatttaacgaataatgaaaac
gatactgacgataagttcgggaaagatggtaaagcaaaatccaaaaagcatgacgatatc
tattccagaacttcactagccagaatattcatgaagttcgaccttgataccttatttttc
atattctatcattatcaaggttcgtatgaacagtttttagctgctagagaacttttcaaa
aatagaaactggctatttaatagggtagatcgttgttggtattataaagaaatcgaaaag
ttaccaccaggaatgggcaaatccgaagaggaatcatggagatacttcgattataagaaa
agttggttagcgagacgttgcggtaacgacttcgtatataatgaagaagatttcgaaaaa
ctgtaa

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