Saccharomyces paradoxus: SPAR_P03270
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Entry
SPAR_P03270 CDS
T08193
Name
(RefSeq) Not5
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
spao
Saccharomyces paradoxus
Pathway
spao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPAR_P03270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spao03019
]
SPAR_P03270
Messenger RNA biogenesis [BR:
spao03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SPAR_P03270
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
SPAR_P03270
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
ATG17_like
NACHT
Motif
Other DBs
NCBI-GeneID:
54634269
NCBI-ProteinID:
XP_033769824
UniProt:
A0A8B8V1D3
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Position
XVI:<667345..>669030
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AA seq
561 aa
AA seq
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MSQRKLQQDIDKLLKKVKEGIEDFDDIYEKFQSTDPSNSSHREKLESDLKREIKKLQKHR
DQIKTWLSKEDVKDKQSVLMTNRRLIENGMERFKSVEKLMKTKQFSKEALTNPDIIKDPK
ELKKRDQVLFIHDCLDELQKQLEQYEAQENEEQTERHEFHIANLENILKKLQNNEMDPDP
VEEFQDDIKYYVENNDDPDFIEYDTIYEDMGCEIQPSSSNNEAPKEANNQSSSLSSIRSS
KKQERSPKKKAPQRDASIADRAVTPVAPAAESASQSISSTPTPLLADTPLHTVKDDSIKF
DNSIPGTPATNVSMKKKESENDSEQQLNFPPDRTDEIQKTIQQDIETNAAFQNPLFNDEL
KYWLDSKRYLMQPLQEMSPKMVSQLESSLLNCPDSLDADSPCLYTKPLSLPHPTSIFFPS
EPIRFVYPYDVPLNLTNNENDTDDKFGKDGKAKSKKHDDIYSRTSLARIFMKFDLDTLFF
IFYHYQGSYEQFLAARELFKNRNWLFNRVDRCWYYKEIEKLPPGMGKSEEESWRYFDYKK
SWLARRCGNDFVYNEEDFEKL
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaaggaagctacaacaggatattgataagcttttgaagaaagtaaaggaagga
attgaagatttcgatgacatatatgaaaaatttcaatcaacagacccttccaattcttcg
catagagaaaagctggaatctgacctgaaaagagaaatcaagaagctgcaaaaacataga
gaccaaataaaaacatggctcagcaaagaagatgtaaaggataaacagagtgtcttgatg
actaataggaggttgatcgaaaatggcatggaaagattcaagtctgtggagaagttaatg
aagacaaaacagttttcaaaggaggctttaacaaatccagatataattaaggatcctaaa
gaactcaaaaagagagatcaagtcttatttattcatgactgtttagatgaactacaaaag
caattagaacagtatgaggctcaagagaatgaggaacaaacagaaaggcacgaatttcac
atcgccaacctagagaatattttgaagaaacttcaaaataatgaaatggacccagatccc
gtggaagaattccaagacgatataaagtactatgtagagaataatgatgatcccgatttc
attgaatacgatacaatttacgaggacatgggttgcgaaatacaaccttcgtcaagtaac
aatgaagctccaaaagaagcaaacaatcaatcttcttctttatccagcattcgttcatcg
aaaaaacaagaacgttctccaaagaagaaagccccacagagagatgcttctatagcagat
agggcggtgacaccagtggcgcctgctgcagagtcagcctcgcaatctatatcttctacg
ccaacacctctgttagctgatacgccattgcatacagtgaaagatgactcaataaagttc
gataattctatccctggtacaccggctaccaatgtgtccatgaaaaagaaggaatcagaa
aacgactcagagcaacaacttaatttcccaccggatagaacagatgaaatccaaaaaaca
atccagcaagatatagagacgaatgctgctttccaaaatcctttattcaacgacgaattg
aaatactggttggactcgaaaaggtatttgatgcaaccacttcaagaaatgtcaccaaag
atggtatcgcaattagaatcctcgctgttgaattgtccagattctctggatgcagattca
ccatgtctctacaccaaaccattatctttacctcacccaacgtctatctttttccccagt
gaaccaatccgatttgtttatccgtacgatgtacctttaaatttaacgaataatgaaaac
gatactgacgataagttcgggaaagatggtaaagcaaaatccaaaaagcatgacgatatc
tattccagaacttcactagccagaatattcatgaagttcgaccttgataccttatttttc
atattctatcattatcaaggttcgtatgaacagtttttagctgctagagaacttttcaaa
aatagaaactggctatttaatagggtagatcgttgttggtattataaagaaatcgaaaag
ttaccaccaggaatgggcaaatccgaagaggaatcatggagatacttcgattataagaaa
agttggttagcgagacgttgcggtaacgacttcgtatataatgaagaagatttcgaaaaa
ctgtaa
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