KEGG   Saccharomyces paradoxus: SPAR_P04200
Entry
SPAR_P04200       CDS       T08193                                 
Name
(RefSeq) Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
spao  Saccharomyces paradoxus
Pathway
spao03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spao00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPAR_P04200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spao03041]
    SPAR_P04200
Spliceosome [BR:spao03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    SPAR_P04200
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_SCAP NBCH_WD40 ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 Beta-prop_HPS5
Other DBs
NCBI-GeneID: 54634362
NCBI-ProteinID: XP_033769917
UniProt: A0A8B8V1N3
LinkDB
Position
XVI:852755..854152
AA seq 465 aa
MSKGIALENLPVDLQHRGVTQNESTADILSQLPHERLQAVLEKIPEDDLEVRNLLLILKK
PEVVENEDVQQRRMRLAEMLMADEIDPGSINNTEGINGEEEDEEDDEEFFTPATSELIQA
RKFLIKYSLDRSRKRLQKEMERHQKFNTRQELLSRRTELRRMANLELAGSQLLSTKPISA
VSLSPDDMVVATGSWAGDLRVLNSQTLQPLTQKLDSHVGKIGAIDWHPDSNNQMVSCGED
GLIKNFQYLYEEGELRLLGDLVGHERRVSDVKYHPSGKFIGSASHDMTWRLWDASTHQEL
LLQEGHAKGVFSLSFQCDGSLVCSGGMDSLSMLWDIRSGSKVMTLAGHSKPVYSVAWSTN
GYQVATGGGDGLINVWDIRKRDEGQLNQILAHRNIVTQVQFSKDDGGKKFVSCGYDNLIN
VYSSDTWLKMGSLEGHTDKIISLDISSDSHFLVTGGWDRSIKLWN
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgagtaaaggtattgcacttgaaaaccttccagttgatttacaacatagaggagtcaca
caaaacgaaagcactgctgatatactgagccagctgccacatgaacgattacaagccgtc
ctagaaaagataccagaagatgatcttgaggtgagaaacttgcttttaattctgaaaaaa
ccggaagtagtggagaatgaagatgtacaacagcgaagaatgcggttggctgaaatgcta
atggctgacgaaattgatcctggtagtattaataacacggaagggataaacggtgaagaa
gaagatgaggaagacgatgaagagttctttactccagcaacatctgaactcatccaggcg
agaaagtttttgataaaatattcacttgatagatctcgaaagaggttacagaaagagatg
gaaagacatcaaaagttcaatacaagacaagaattacttagtcggcgtacggaactacga
cgtatggctaatttagagctcgctggttctcaattgttatctacaaagcctatttcagca
gtttctttatctcccgatgacatggttgtcgcaactggaagctgggcaggtgatcttcgg
gtattaaattctcaaacactgcagccgttgacgcaaaaactcgattctcacgtaggaaaa
attggggctatagattggcatcctgattcaaacaaccaaatggtttcatgcggggaagac
gggctcatcaaaaactttcaatatttatacgaagagggcgaacttagattattgggagat
ctcgtgggacatgaaagacgcgtttctgatgtgaaataccaccctagtggcaaatttata
ggcagcgcctctcacgatatgacttggagactttgggatgcatcaacacatcaggaacta
ttactacaagaaggccatgctaagggcgtatttagtctgtcttttcaatgcgatgggtct
cttgtttgtagcggtggcatggactccctttcaatgctatgggacatacgatctggaagt
aaagtgatgaccctagcaggacactccaagcctgtttactccgtagcttggtcaacaaac
gggtaccaagtagccactggtggtggtgatggattaattaatgtttgggacatcagaaaa
cgtgatgaaggtcaattaaatcaaatattggcgcatcgtaacatcgttacgcaagtgcag
ttttcaaaagacgacggcggcaagaaatttgtctcttgtggttatgataatttgatcaat
gtgtatagtagtgatacatggttaaaaatgggaagtctagaaggtcacactgataaaatt
ataagtttggatatttcaagcgattctcattttttagtgaccggtggttgggataggtct
attaagctctggaattga

DBGET integrated database retrieval system