Sphingomonas alpina: H3Z74_00165
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Entry
H3Z74_00165 CDS
T07078
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
spap
Sphingomonas alpina
Pathway
spap00300
Lysine biosynthesis
spap00470
D-Amino acid metabolism
spap01100
Metabolic pathways
spap01110
Biosynthesis of secondary metabolites
spap01120
Microbial metabolism in diverse environments
spap01230
Biosynthesis of amino acids
Module
spap_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spap00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
H3Z74_00165 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
H3Z74_00165 (dapF)
Enzymes [BR:
spap01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
H3Z74_00165 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
QNQ09719
UniProt:
A0A7H0LJ66
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All DBs
Position
31738..32679
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AA seq
313 aa
AA seq
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MRLDFVKCHGSGNDFPLIDARDLDLDDMVWAGVARALADRRGPVGGDGLLLLTGGDKLHD
FGMRMFNSDGSEAETCLNGLRCVARAGFEALSIERAEVQLKTSSAHAERDADLAPGVVTI
RETAGPADLDVTQWPLHGAGHQIVQQTIAALPSSRLFTAVAMPNPHLVSFVETIDDAELV
VIGELCEAAPDWLPNRANVSFVEMRGADLFVRTFERGVGLTDSCGSAMAASVFAACLTGR
VEFGVELSVFNRGGLVRGQAESDGMVRLSGNATYDWAGSADVDADRGIAGDVTVDRHFND
EIAAWAGLIDAIA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcgatttcgtcaaatgccatggttcgggaaatgatttcccgctgatcgatgcg
cgcgatctcgatctcgacgatatggtctgggccggggtcgcgcgtgcgctggccgatcgg
cgcggaccggtcggtggcgacgggctgttgctgctgactggtggggataagctgcacgat
ttcggcatgcgcatgttcaattccgacggcagtgaggcggagacatgcctcaacggcttg
cgctgcgtggcgcgggctggtttcgaggcattgtcgatcgagcgcgccgaggtgcagctg
aagacatcgagtgcccatgccgagcgcgatgccgatctcgcgccgggcgtggtgacgatc
cgcgaaacggccggaccggccgatctcgatgtgacgcaatggccgctgcacggcgccggg
caccagatcgtgcaacagacgatcgccgcattgccctcgtcccggctgttcacggcagtg
gcgatgcccaatccgcatctggtgagtttcgtcgagacgatcgacgacgcggaactggtc
gtgatcggtgagctgtgcgaggcggcgccggactggttgcccaaccgcgccaatgtctcg
ttcgtcgaaatgcgcggggcggatctgttcgttcggacattcgagcgtggcgtcgggctg
accgacagttgtggcagtgcgatggcggcgtcggtcttcgctgcatgcctgaccgggcgc
gtggagttcggcgtggaactgagcgtcttcaatcgcggcgggctggtcaggggacaggcc
gaaagtgacggcatggtccgcttgtccggtaatgcgacctatgactgggcaggatcggcc
gatgtcgatgcggaccggggaatcgccggcgacgtaacggtcgatcggcatttcaacgac
gaaatcgccgcctgggcggggctgatagacgcgatcgcctga
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