Sphingomonas alpina: H3Z74_01315
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Entry
H3Z74_01315 CDS
T07078
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
spap
Sphingomonas alpina
Brite
KEGG Orthology (KO) [BR:
spap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spap03019
]
H3Z74_01315 (rnc)
03009 Ribosome biogenesis [BR:
spap03009
]
H3Z74_01315 (rnc)
03036 Chromosome and associated proteins [BR:
spap03036
]
H3Z74_01315 (rnc)
Enzymes [BR:
spap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
H3Z74_01315 (rnc)
Messenger RNA biogenesis [BR:
spap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H3Z74_01315 (rnc)
Ribosome biogenesis [BR:
spap03009
]
Eukaryotic type
90S particles
RNase
H3Z74_01315 (rnc)
Prokaryotic type
rRNA processing factors
H3Z74_01315 (rnc)
Chromosome and associated proteins [BR:
spap03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
H3Z74_01315 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QNQ11810
UniProt:
A0A7H0LQ57
LinkDB
All DBs
Position
complement(306348..307067)
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AA seq
239 aa
AA seq
DB search
MVQRGTVEPHRGRLLNDGRSDDLTGWIANTFGHRPADIAPFERALTHGSQAAANYERLEF
LGDRVLGLVMAEWLFALFPNEPEGALSKRLNALVTGAVCADVARGLGIAAHLKLGKQARD
DGATDSDNVLGDVMEALIGALYLDGGLDVARAAIRSGWGERVKTQGSAPQHPKSALQEWA
AAHNRRTPAYEVVDRSGPHHAPRFTVKASIGTLAEATAEGSSKQEAETAAAAALLAKLG
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
ctggttcagcgcggcacggtggagccgcatcggggaaggcttttgaacgacggccgcagc
gatgacctgacgggctggatcgccaacacgttcggccatcgcccggccgacatcgccccc
ttcgaacgcgccctgactcatggcagccaggccgcggcgaattacgagcggctggagttt
ctcggcgaccgcgtgctcggcctggtcatggccgaatggctgttcgccctgtttccgaac
gaaccggagggcgcgctgtcgaagcggctcaacgcgctggtcactggcgcggtgtgtgcc
gatgtcgcacgcgggcttggcattgccgctcatctcaagctcggcaagcaggcacgcgac
gacggcgcgaccgacagcgacaatgtgctgggcgatgtgatggaggcgctgatcggcgca
ctttatctcgacggcggtctcgacgtggcgcgcgcggcgatccgcagcggctggggcgag
cgggtcaagacgcaaggctcggcgccgcagcaccccaagtccgcgctgcaggaatgggca
gcggcgcataaccgccgcaccccggcctatgaagtggtcgaccggtccggcccgcaccat
gcgccacgcttcaccgtgaaggcctcgatcgggacgctggcggaagcgacggccgagggg
agttcgaagcaggaagcggagacggcggcggcggcggcgttgctggcgaagctggggtga
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integrated database retrieval system