Sphingomonas alpina: H3Z74_06340
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Entry
H3Z74_06340 CDS
T07078
Name
(GenBank) alginate lyase family protein
KO
K20525
oligo-alginate lyase [EC:
4.2.2.26
]
Organism
spap
Sphingomonas alpina
Brite
KEGG Orthology (KO) [BR:
spap00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
H3Z74_06340
Enzymes [BR:
spap01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.26 oligo-alginate lyase
H3Z74_06340
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Gene cluster
GFIT
Motif
Pfam:
Hepar_II_III_C
Alginate_lyase
Alg17C_C
Beta-AFase-like_GH127_cat
Motif
Other DBs
NCBI-ProteinID:
QNQ10803
UniProt:
A0A7H0LMA0
LinkDB
All DBs
Position
1378127..1380313
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AA seq
728 aa
AA seq
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MRISLWALGFALATLTPGLASAQTAPVLFDSAGLKTMAADAKRYPLFAAEFERTKKSVDK
AMRAGIVVPVPKDPGGGFTHEQHKRNYMALYGAGLLYRITGNKAYADFARTMLLEYARLY
PTLGPHPAKANEAAGRLFWQSLNDSVWLVYGVQGYDAIRDTLSPADRETIDTNVFRKMAE
FLSVGNAKTFNLIHNHATWAAAGVGMTGYVLHDPELVARALKGTDKSGKAGFLAQVDQLF
SPDGYYTEGPYYQRYALQPFVVFADAIQANQPELKIWERHGGVLPKAIRSTIQLTYDGYF
FPLNDAMPDKSLKTDELYQAVAIGYAATRDPSFLSIAKWQGRTILTPAGLAVARDLAAGK
AQPFAYASQLFRDGPNGDQGALAVLRSSAEDDAEVLVAKNSAMGMGHGHFDKLGWILYDG
GNAIVTDYGSARFLNIESKDGGRYLKENESWAKQTVAHNTLVVNETSNFGGKWKVGEDLA
PKQLFFSGDDALKASTAEMAGAWPGVTFRRTLAQLPLGKGSPVVLDLLRVTGGAPATYDL
PLHYAGHITDVGFPLQSNVAARPVLGTANGYQHIWVDATGTPTADNATLTWINGGRFYTY
RMLPPAGSTVILGESGANDPRFNLRREPMLIQRVTGAKDTVFVSLLEPHGSYDAAAETTV
ASASQIKSLRHVRTADGDVIVIEPVKGAPVIVAVADDVATGKQHTAQVDGRTIRWTGHIA
RIDAVGAK
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatttccctctgggcgctgggcttcgctctggcgacgctgacgccgggcctcgcc
agcgcacaaaccgcgccggtgctgttcgattccgccggcctgaagaccatggcggcggac
gccaaacgctatccgttgttcgcggcagagttcgaacggaccaagaagtcggtcgacaag
gcgatgcgcgccgggatcgtcgtgccggtgccgaaagatccgggcggcgggttcacgcat
gagcagcataagcgcaactatatggcgctctatggtgcggggctgttgtaccgcatcacc
ggcaacaaggcctatgccgatttcgcgcgcaccatgttgcttgagtatgccaggctttat
ccgacgcttgggccgcatccggccaaggcgaacgaagcggcgggacggctgttctggcag
agcctgaacgacagcgtctggctggtctatggcgtgcagggttacgacgcgatccgcgac
acgctgagccccgccgaccgcgagacgatcgacaccaatgtgttccgaaagatggccgag
ttcctgtcggtcgggaatgccaagacgttcaacctgattcacaaccacgcgacctgggcg
gcggccggcgtgggcatgaccggttatgtcctgcacgatcccgaactggtcgcgcgcgcg
ctgaagggtaccgacaagagcggcaaggccgggttcctggcgcaggtcgatcagctcttc
tcgcccgacggctattacaccgaagggccctattatcagcgttatgcgctgcagccgttc
gtggtgttcgccgatgcgatccaggctaatcagcccgaactgaagatctgggaacggcat
ggcggcgtgctgcccaaggcgatccgcagcacgatccagctgacctatgacggctatttc
ttcccgctcaacgacgcgatgcccgacaagagcctgaagaccgacgaactctatcaggcg
gtggcgatcggctatgcggcgacccgcgacccgagcttcctgtcgatcgcgaaatggcag
gggcgcacgatcctgacgccggccgggctcgccgtcgcgcgcgatctcgccgcgggcaag
gcgcagccctttgcctatgcctcgcaactgtttcgcgacgggccgaacggcgatcagggc
gctctggccgtgctgcgctcgagcgccgaggacgatgccgaagtactggtcgccaagaac
agcgcgatgggcatggggcatggtcatttcgataaactgggctggatcctctacgatggc
ggcaacgcgatcgtgaccgactacggctcggcccgcttcctcaacatcgagagcaaggac
ggcggccgctacctcaaggaaaatgagagctgggcgaagcagacggtcgcgcacaacacg
ctggtggtgaacgagacgtcgaacttcggcggcaagtggaaggtcggcgaagatctggcg
ccgaagcagctgttcttctccggcgatgacgcgctgaaggcgagcaccgccgaaatggcc
ggcgcctggcccggagtcaccttccgccgcacgctggcgcaattgccattgggcaagggc
agtccggtcgtgctcgacctgctgcgcgtcaccggtggcgcaccagcgacctacgacctc
ccgctgcattatgcggggcacatcaccgatgtcggtttcccgctgcagtcgaacgtcgcg
gcgcggccggtgctgggcacggccaatggttatcagcatatctgggtcgatgcgaccggt
acgccaaccgccgataacgcgacgctgacctggatcaatggcggtcgtttctacacctat
cgcatgctcccgccggccggcagtacggtgatcctgggcgagagcggcgccaacgatccg
cgcttcaacctgcgtcgcgagcccatgctgatccagcgcgtgacgggggcgaaggacacg
gtgttcgtctcgctgctcgagccgcacggatcctatgacgcggcggcggaaacgacagtc
gccagcgccagccagatcaagtcgctgcgccatgttcgcactgcagatggcgacgtgatc
gtgatcgagccggtgaagggcgcgccggtgatcgtcgcggtcgcagacgatgtcgcgacg
ggcaagcaacacaccgcgcaggtcgatggccgcacgatccgctggaccgggcatatcgct
cgtatcgacgcagtgggcgcgaagtga
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