Sphingomonas alpina: H3Z74_07775
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Entry
H3Z74_07775 CDS
T07078
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
spap
Sphingomonas alpina
Brite
KEGG Orthology (KO) [BR:
spap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spap03400
]
H3Z74_07775 (addA)
Enzymes [BR:
spap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H3Z74_07775 (addA)
DNA repair and recombination proteins [BR:
spap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
H3Z74_07775 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
QNQ11048
UniProt:
A0A7H0LMZ5
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All DBs
Position
1686805..1690221
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AA seq
1138 aa
AA seq
DB search
MDASVDNRPLPVLKDNQARASDPRAHVWLSASAGTGKTQVLAARVFRLLLQGVDPGAILC
LTFTKAGAAEMAGRISQRLAAWVRMPKTALFGDLHALGEQPDDALMERARTLFAKVLDAP
GGGIRIQTIHGFCQSLLAAFPIEAGLVPGFRPLEAREESVLAREALAEMLVDASQQAIDT
VGALSLRLGEGEAENFLRDCARSLAALQQLPIDLQSFLRRELDLPEGDIEQAIAAACDDN
VFDHETLDAIGGFNASWGTKSGVERAGLVSAWLDRSPAERAATLGELNKIWAKADLDIRS
FGKGQAPQDPDYADLATGMYDYCANLLQMRVRGAYADLLADALGVGRDYANAYALAKRRV
GAVDFDDLIHSVVELLAQPGMGEWVRYKLDQVTEHILIDEAQDTNPRQWAIVAALAEEFF
SGLGVHGERTRTLFTVGDYKQAIFGFQGTDPIFFRAAEQRFLAKAEAIGDDGVPFERLSL
TASFRSTRPVLEFVDAAIDSIGDPGLGEIADRELHASEVAGPGTVTLWPPVVTGGSEEDA
EGWIPDATRALAAQIARAVKDWLYGPVPLMLESKGRMLRPEDVMILVKRRGELASLIVAR
LYAEGVPVAGVDRLRLNAPLSVQDLLAAIRFVLQPGDDLSLASLLVSPLIGWSQDELMAA
APRGSGSLWAHLRRTQPAARLAPLLAMLARADIATPYRFLEELLSGPLDGRRKMLRRLGQ
EARDPIEELLNAALDFETQSTPSLQRFLDWFDRGDVEIVRDPSAPLDAVRVMTAHGAKGL
QAPLVILADATADPSRTPARVLKWAPDGGDAFPIFRPRAAEVGGPLTELVERTSRRELEE
HWRLFYVAATRAEERLIVAGALGPMAKGVPPETSWYAASHRAFTALGIETSEEARHYAGR
TPQRPVAADRRAGIGRTSAIELPDWVKRKAPVEARPPRPLAPSSLGEDAVADPPPSPVLR
LAAERGRLIHALFERLPAVAADQRVQAAERWLAGAGAVESPADRAEIAATVLSVLDDPRF
DDLFGPDSLAEAPIAAVVADGVVVSGTVDRLLVTDSSVRVIDFKTGRYAPATPADIPTYH
LRQMAAYGAALAAIFPDRAIDMALLYTAGPVLFELPPAMLEAHKPGYAAPEQSLTPSA
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgagcgtggataaccgcccgctgccagtcctgaaggacaatcaggcacgggcg
agcgacccgcgtgcgcatgtctggctgtcggcatcggccggcaccggcaaaactcaggtc
cttgccgcgcgtgtgttccgattgctgctgcaaggcgtcgatcccggtgcgatcctgtgc
ctgacctttaccaaggctggtgctgctgaaatggccgggcggatcagccagcggcttgcc
gcgtgggtgcgcatgcccaaaaccgccttgttcggcgacctgcacgcgctcggcgagcaa
cccgatgacgcgctgatggagcgggcgcggacgctgttcgccaaggtgctcgacgcgccc
ggcggcggtatccgcattcagaccatccacggcttctgccagagcctgctcgcggccttt
ccgatcgaggccgggctggtgccgggctttcgtccgctcgaagcgcgcgaggaatcggta
ctggcgcgtgaggccctggccgagatgctggtcgatgcgagccagcaggcgatcgacaca
gtcggcgcgctgagcctcaggctcggcgagggcgaggcggagaatttcctgcgcgattgc
gcccgctcgctggcggcgctgcagcaattgccgatcgacctgcagtcgttcctgcgccgc
gaacttgatttgcccgagggcgatatcgaacaagccatcgccgcggcctgcgacgacaat
gtgttcgaccatgaaacgctcgacgcgatcggcgggttcaatgccagctgggggaccaag
agcggggtcgaacgtgcaggcttggtatcggcctggctcgatcgctcgccggccgagcgc
gccgcgaccctgggcgagctcaacaagatctgggccaaggccgatctcgatatccgctcg
ttcgggaaggggcaggcgccacaggatcccgactatgccgacctggcgacgggcatgtat
gattattgcgccaacctgctgcagatgcgcgtgcgcggcgcctatgccgatctgctcgcg
gatgcgctgggtgtcgggcgcgattatgccaatgcctatgcactggccaagcggcgcgtc
ggggcagtcgatttcgacgacctgattcattcggtggtcgaactgcttgcccagcccggc
atgggcgaatgggtgcgctacaagctcgaccaggtcaccgagcatatcctgatcgacgag
gcgcaggacaccaatccgcggcaatgggcgatcgtcgccgcgttggcggaggaattcttc
tccggccttggcgtgcacggcgagcgcacccgcaccctgttcaccgtcggtgactacaaa
caggcgatcttcggctttcagggcaccgatccgatcttcttccgcgcggcggagcaacgt
tttctcgccaaggccgaggcgatcggggatgacggtgtgccgttcgagcgtctgtcgctg
accgcgtcgtttcgctcgacccgtccggtgctcgaattcgtcgacgcggcgatcgactcg
atcggcgatccgggcctgggggagatcgccgatcgcgaacttcacgccagcgaagtcgcc
ggccccggcaccgtgaccctgtggccgcccgtcgtcaccggcggcagcgaggaagatgcc
gagggctggattccggatgcgacccgcgcgctcgcggcgcagattgcccgtgcggtgaag
gattggctctacggcccggtgccgctgatgctggaaagcaaggggcgcatgttgcggccc
gaggatgtgatgatcctggtcaagcggcgcggcgaactcgcctcgctgatcgtggcgcgg
ctttatgccgagggggtgcccgtcgccggggtcgaccggctgcgcctcaatgcgccgctc
agcgtacaggatctgctcgccgcgatccgcttcgtgctgcagccgggcgacgacctgtcg
ctggcaagcctgctcgtgtcgccgctgatcggctggagccaggacgagctgatggccgcg
gcgccacgcgggtcgggcagcctgtgggcgcatctgcgccgcactcagccggcggcgcgg
ctcgcgccattgctggcgatgctggcgcgcgccgacatcgctacgccctatcgcttcctg
gaggaattgctctccggcccgctcgatggacggcgcaagatgctgcgccgcctcggccag
gaagcgcgcgatccgatcgaggaactgctgaacgccgcgcttgatttcgaaacccagtcc
accccgtcgctgcagcgcttcctcgactggttcgatcgcggcgatgtcgagatcgtacgc
gacccgtcggcgccgctcgacgcagtgcgagtgatgacggcgcatggtgcaaagggcttg
caggcgccgctggttatcctggccgatgcgacggccgatccgtcgcgcacgcccgcacgg
gtgctgaaatgggcgcccgatggtggagatgccttcccgatcttccggccgcgcgccgca
gaggtcggcggaccgctgaccgagctggtcgagcgcacctcgcgccgcgagctggaggag
cattggcggctgttctatgtcgccgcgacgcgtgcggaggagcgattgatcgtagcggga
gcgctcggcccgatggcgaaaggcgtgccgccggaaaccagctggtacgcagcgtcgcac
cgcgcgttcactgcgctgggcatcgaaacgtccgaggaggcgcggcattatgccgggcgc
acgccgcaacgcccggtcgccgccgacaggcgggcgggcattgggcgcacgtcggcgatc
gagttacccgactgggtaaagcgaaaagcgccggtcgaggcacgtccgccgcgcccgctg
gcaccatcgtcactgggcgaggatgcggtcgccgatccgccgccatcgccggttctgcgc
ctggcggccgagcgcgggcggctgatccatgcgttgttcgaacgcttgccggcggtcgcg
gccgatcagcgcgtacaggctgcggagcgctggttggcgggggcaggggccgtcgaatcc
ccggcggatcgcgccgagatcgccgcgaccgtgctctcggtgctcgacgacccgcgcttc
gacgatctgttcggcccggactcgctggcagaggcaccgatcgccgcagtcgttgccgat
ggcgtggtcgtgtcgggcacggtcgaccgcctgctcgtcacggactccagcgtgcgcgtg
atcgacttcaagaccgggcgctacgcccctgcgacgccggcggatatcccaacctatcat
ttgcgccagatggcggcctatggcgcggcactggcggcgatcttcccggatcgcgccatc
gacatggccttgctctatacggcaggaccggtgctgttcgaattgccgcccgccatgctc
gaagcgcacaagcccggctatgccgcgccggagcaaagcttgaccccgagcgcttga
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