Sphingomonas alpina: H3Z74_08675
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Entry
H3Z74_08675 CDS
T07078
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
spap
Sphingomonas alpina
Pathway
spap03030
DNA replication
spap03430
Mismatch repair
spap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H3Z74_08675 (dnaE)
03430 Mismatch repair
H3Z74_08675 (dnaE)
03440 Homologous recombination
H3Z74_08675 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spap03032
]
H3Z74_08675 (dnaE)
03400 DNA repair and recombination proteins [BR:
spap03400
]
H3Z74_08675 (dnaE)
Enzymes [BR:
spap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H3Z74_08675 (dnaE)
DNA replication proteins [BR:
spap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H3Z74_08675 (dnaE)
DNA repair and recombination proteins [BR:
spap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H3Z74_08675 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Scaffold
tRNA_anti-codon
DUF655
COE1_HLH
Motif
Other DBs
NCBI-ProteinID:
QNQ11206
UniProt:
A0A7H0LNF3
LinkDB
All DBs
Position
1895563..1899072
Genome browser
AA seq
1169 aa
AA seq
DB search
MPHSAFVPLRIFSSYTMLDGAIEPKAIAKRAQELGFPAAALTDRNGLYAAMAFSDAAKGA
GVQPIIGAMLGVARPDMPEGVEAPLDWLALYAQDEAGYQNICALVSMAHLDRPIEQAPHV
DFATLEGRTDGVIALTAGREGGLTRLLAEGQEDRARAYLDRLQSLFRDRLYIELTRRLDE
VEGRAEPGLLDLAYEHDLPLVATNPCCFADEDFSEAHDAMLCIANSTYIASDDRPRSSPD
AWMKPAKDMRMLFADLPEAIANTLVVAQRCAVAAPARKPILPSLAGDRDAESEALRVDAR
AGLDMRLRRIAELQNLPFAGDTPDDWTIPYRERLEFELDVIIQMGFPGYFLIVADFIKWA
KDHDIPVGPGRGSGAGSVVAWALTITDLDPMKLGLLFERFLNPERVSMPDFDIDFCETRR
EEVIRYVQRKYGSDHVAQIITFGRLKARAVLKDTGRVLQMSYGQVDRLAKLIPNHPTDPW
TLDRALNGVSELVQEYRNNDGVKHLLDLAMKLEGLPRHSSTHAAGVVIGDRPLNQLVPLY
RDPRSDMPVTQFDMKYVEAAGLVKFDFLGLKTLSVLKKAVQLLAKRGIKIDLDALAWDDE
GVYKLLQKGDTVGVFQLESEGMRRTLAAVRPSNFGDIIALVSLYRPGPMDNIPSFGARKN
GREPITYPHPLLEQILSETYGIFVYQEQVMQAAQVLAGYSLGQADLLRRAMGKKIKKEMD
DQRAGFVEGCMAVNKIAAPKANELFDLIDKFAGYGFNKSHAAAYALLAYQTAWLKAHHPH
DFFAASMCYDLHLTDKLAIFADDMRRMGVKCHAPCVNESEAEFSVEYDDDGLAVRYALAA
LKGVGEGAMEKLVDERVANGPFDTLDDFARRVDPRLLNKRQLEGLAGAGAFDTIDTNRAG
IFAIAETLLATAARTQEMKVSGQGGLFGEGEAQEPAIKLPLSARWTLAQRMEQEKEAFGY
YFSAHPVDRHGHLARAHGARNFAALGDLSIPDDGSRAGATMAALVEDARWRTSAKGRRYL
MATLSDPSGQFVATCFDDVVAAELEEAARNGGCGILTVELDRRPGEESPRVTIKRIQPFE
ALANNARFVLEAAIETPEAVRALAEMLAEHRGGRGQVWIRAALPGGGTARVLLGRDFLLD
GELAGRIETLQDVGDVELRTSETRLALVG
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgcctcattccgcgttcgtacccttgcgtatcttctcgtcctacacgatgctcgatggc
gcgatcgagccgaaggcgatcgccaaacgcgcccaggaactgggtttcccggccgccgca
ctgaccgaccgcaacggcctttatgccgcgatggccttttccgatgcggcgaagggggcc
ggagtgcagccgatcatcggcgcgatgctcggcgtcgcacggcccgacatgcccgaaggc
gtggaggcgccgctcgactggctcgcgctctatgcgcaggatgaggccggctatcagaat
atctgcgcgctggtgtcgatggcgcatctcgaccggccgatcgaacaggcgccgcatgtc
gatttcgcgacactcgaagggcgtaccgatggcgtgatcgcgctgactgcgggccgcgag
ggtggcctgacgcggctgctggcggaagggcaggaggatcgtgcccgcgcctatctcgac
cggctgcagtcgctgttccgtgaccggctctatatcgagctgacgcggcggctcgacgag
gtcgagggcagggcggagccgggcttgctcgacctggcctatgaacacgacctgccgctg
gtcgcgaccaacccgtgctgctttgccgatgaggatttcagcgaggcgcatgacgccatg
ctgtgcatcgccaattcgacctatatcgccagcgacgatcgcccgcgcagttcgcccgac
gcctggatgaagccggccaaggacatgcgcatgctgttcgcggacctgcccgaagcgatc
gccaacacgctggtcgtcgcacagcgctgtgccgtggcggctccggcacgcaagccgatc
ctgccaagtcttgccggcgaccgtgacgccgaatccgaagcgctgcgtgtcgatgcgcgg
gccgggctcgacatgcggctgcggcggatcgcggagctccagaacctgccgttcgcaggc
gatacgcccgacgactggaccattccctatcgcgagcggctggaattcgagctcgacgtc
atcatccagatgggttttcccggctatttcctgatcgtcgcggacttcatcaaatgggcc
aaggatcatgacattccggtcggtccgggccgtggttcgggtgccggctcggtcgtcgcc
tgggcgctgaccattaccgacctcgacccgatgaaactcggcttgctgttcgaacgcttc
ctcaacccggaacgcgtgtcgatgcccgacttcgacatcgatttctgcgaaacgcggcgc
gaagaggtgatccgctatgtgcagcggaaatatggctcggatcacgtggcgcaaatcatc
accttcgggcggttgaaggctcgtgccgtgctcaaggacaccggccgcgtgttgcagatg
agctatggccaggtcgaccggctggccaagctcattcccaatcacccgaccgatccctgg
acgctcgaccgggcgctcaatggcgtcagcgagctggtgcaggaatatcgcaacaatgac
ggggtgaagcaccttctcgacctggcgatgaagctcgagggattgccgcggcacagctcg
actcatgccgccggcgtggtgatcggcgaccgtccgctcaaccagctcgtgccgctctat
cgcgatccgcgatcggacatgccggtcacccagttcgacatgaaatatgtcgaggcggcg
ggcctggtgaagttcgactttctcggattgaaaacgctatcggttctgaagaaggcggtg
caacttcttgcaaaacgtggaattaagatcgaccttgatgcgctcgcctgggatgatgag
ggcgtctacaagctgctccagaagggcgacacggtcggcgtgttccagctcgaatccgaa
ggtatgcggcgtacgctggcggcggtccgcccgtccaatttcggcgacatcatcgcgctc
gtgtcgctctatcgtccgggcccgatggacaatatcccgagcttcggcgcgcgcaagaac
gggcgcgagccgatcacctatccgcatccactgctcgaacagatcttgtccgaaacctat
ggcatcttcgtctatcaggaacaggtgatgcaggccgcgcaggtgctggccgggtacagc
ctgggccaggccgatctgttgcgccgggcgatgggcaagaagatcaagaaggagatggac
gaccagcgcgccgggttcgtcgagggttgcatggcggtcaacaagatcgccgcgcccaag
gcgaacgagctgttcgacttgatcgacaagttcgccggatatggtttcaacaagtcgcac
gccgccgcctatgcgctgctcgcctatcagaccgcctggctgaaggcgcatcatccgcac
gacttcttcgccgcgtcgatgtgctacgacctgcacctgaccgacaaactcgccattttc
gcggacgacatgcggcgcatgggggtcaaatgccatgcaccgtgcgtcaacgaaagcgag
gcggagttcagcgtcgagtatgacgatgacgggctcgccgtacgttacgcacttgccgcg
ttgaagggcgtgggcgagggcgcgatggagaagctggtcgacgaacgcgtcgccaatggc
cctttcgacacgctcgacgattttgcgcgccgggtcgatccgcgtctgctcaacaagcgc
cagcttgaaggcctggccggcgccggggcgttcgatacgatcgacaccaaccgcgccggt
atcttcgccatcgccgaaacgttgctcgccactgctgcccgcacgcaggagatgaaggtc
agcgggcagggtggtctgttcggcgaaggcgaggcgcaggaaccggcgatcaagctgccg
ctgagcgcacgctggacgctggctcaacgcatggagcaggagaaggaagcgttcggctat
tatttctccgcgcatccggtcgaccgtcacggtcatctcgcccgcgcgcatggcgcacgc
aattttgcggcactaggtgatctctccattcctgacgatggcagccgcgccggagcgacg
atggccgcgctggtcgaggatgcacgctggcgcacctcggccaagggccggcgctacctg
atggcgaccctgtccgatccgtccggccagttcgtcgcgacctgtttcgatgacgtggtg
gcagcggagcttgaggaagcggcgcggaacggcggctgcggtatcctgaccgtcgagctc
gaccgtcgcccgggcgaggaatcgcctcgcgtcacgatcaagcggatccagccgttcgag
gcactggccaataatgctcgcttcgtcctcgaagccgccattgagactcccgaggccgtc
cgggcgctggccgaaatgctcgccgagcatcgcggcgggcgtggccaggtatggatcagg
gcagcccttcccggcggcggtaccgcgcgcgtgctgctcggtcgcgactttctgctcgac
ggcgagcttgccggacgcatcgagaccctgcaggatgtcggcgatgtcgagctgagaacc
tccgagacgaggctcgctctggttggatga
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integrated database retrieval system
