Sphingomonas alpina: H3Z74_08725
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Entry
H3Z74_08725 CDS
T07078
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
spap
Sphingomonas alpina
Pathway
spap03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H3Z74_08725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spap03400
]
H3Z74_08725
Enzymes [BR:
spap01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
H3Z74_08725
DNA repair and recombination proteins [BR:
spap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H3Z74_08725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
GYD
Phage_min_cap2
Motif
Other DBs
NCBI-ProteinID:
QNQ11216
UniProt:
A0A7H0LNG3
LinkDB
All DBs
Position
complement(1909912..1910646)
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AA seq
244 aa
AA seq
DB search
MGADQNFDWRHAAASAIDWWREAGVDATIDEAPRNWLARVAATPVVETAPDVVAPFVLPD
TMDAFLAWRSGPDAPEAGWPEQMIPAQGTVSSDLMVLVDLPEREDAATATLMSGAVGRLF
DRMLAAIGRDRNSVYLAAVCTARPTSGRVTPEMEERLHELVRHHVALAAPKRVLLLGNAP
SRALLGADAARARGGLRTLNLKVGTVETEIEAVASFHPRFLLEKPAFKAEAWKDLQMLIG
GLDS
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgggggctgaccaaaatttcgactggcgacacgccgctgcaagcgcaatcgactggtgg
cgcgaggccggggttgatgcgacgatcgacgaagctccgcgcaactggctggcgcgcgta
gcggcgacgcccgtcgtcgagactgcgcccgatgtcgtggcgccgttcgtcttgcccgat
acgatggatgcctttctcgcctggcggtcggggcccgatgcgccagaagccggctggccg
gagcaaatgatcccggcgcaaggcactgtatcgtcggatctgatggtgctggtagacctg
ccggagcgcgaggacgcagcaaccgcgacgttgatgagtggcgccgtcggacgattgttc
gatcgaatgcttgcagcgatcgggcgcgatcgcaattcggtttatctcgccgccgtctgt
acagcccggccgacgagcgggcgggtcacgcccgaaatggaagaacggctgcacgaactg
gttcggcatcatgtcgcgctcgccgcgccaaaacgggtgcttttgctcggcaatgcgccg
agccgtgcgttgcttggggcggatgcggcgcgagcgcgcggtggtttacgaacgcttaac
cttaaggttggcacggtggaaaccgagattgaggcggtcgcgagtttccatccgcgcttc
ctgctcgaaaaaccggctttcaaggccgaggcctggaaagacctgcagatgttgatcggg
ggattggattcatga
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