Sphingomonas alpina: H3Z74_10220
Help
Entry
H3Z74_10220 CDS
T07078
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
spap
Sphingomonas alpina
Pathway
spap03420
Nucleotide excision repair
spap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H3Z74_10220
03430 Mismatch repair
H3Z74_10220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spap03400
]
H3Z74_10220
Enzymes [BR:
spap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H3Z74_10220
DNA repair and recombination proteins [BR:
spap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H3Z74_10220
MMR (mismatch excision repair)
Other MMR factors
H3Z74_10220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
QNQ11468
UniProt:
A0A7H0LP65
LinkDB
All DBs
Position
2225594..2227894
Genome browser
AA seq
766 aa
AA seq
DB search
MSLPAPSPDDPPYLSGLNAPQREAVLTTEGPVLVLAGAGTGKTAALTARLAHLLFTKRAW
PSEILSVTFTNKAAREMRHRVGRLVGDVVEGMPWLGTFHAIGAKMLRRHAELVGLQSNFT
ILDTDDQLRLLKQLITAADLDEKRWPARALGGLIDGWKNKGLTPADLDAGESELYANGRG
KELYAAYQARLIALNACDFGDLLLHMLVILKRDREVLKMYQERFKYIMVDEYQDTNSVQY
LWLRLLAQEHKNICCVGDDDQSIYSWRGAQVENILKFEKDFPGAAIIRLEQNYRSTPHIL
AAASGVIANNSGRLGKTLWTDEPDGEKVKVIGVWDGPEEARRVGEEIESCQRAGKSIDDI
AILVRAQHQTREFEDRFISIGMPYRIVGGFRFYERAEIRDALAYLRVVAQPADDLAFERI
VNVPKRGLGDKAVQKVHQLARAEGIPLATAAARILDTDELTPQARRAFGNLVGDMARWRA
LANDTPHPELARQILDESGYTAMWQVEKSAEAAGRLENLTELVRAMEEYESLTAFLEHVS
LVMDNEAAAEEAKVTIMTIHAAKGLEYDTVFLVGWEEGLFPSQRSLDEGGLASLEEERRL
AYVAITRARRRAVIIHAANRRIYGQWTSSIPSRFVGELPDAHTESESSMSGGESLWRANW
SERADPFADVARGTGRGPGWQRAAGVNPGGSFTSRTFTREPSRVVESRASAVSIGNKGRS
DVAVGMRVFHQKFGYGEIAEIEGNKLEIDFEAAGRKRVMDSFVTVG
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttcccgcgccttcccccgacgacccgccctatctctcgggcctcaacgcgccg
cagcgagaggccgtgctgaccaccgaaggtcccgtcctggtcctcgccggtgccggcacc
ggcaagaccgcggcgctgaccgcgcggctcgcgcatctgctgttcaccaagcgcgcctgg
ccgtcggagatcctcagcgtcaccttcaccaacaaggcagcgcgcgagatgcgccaccgc
gtcgggcggctggtcggcgatgtggtcgagggcatgccgtggctcggcactttccacgcg
atcggcgcgaagatgctgcgccgccatgccgagctggtcggactgcaatccaacttcacc
atcctcgataccgacgatcagctgcgccttttgaagcaactgatcaccgccgccgatctg
gatgagaaacgctggccggcgcgcgcgctgggcgggttgatcgacgggtggaagaacaag
gggctcactcccgccgatctcgatgccggcgagagcgagctctacgccaatggccgcggc
aaggagctgtacgccgcctatcaggcgcgcctgatcgcgctcaacgcctgcgatttcggc
gacctgctgctgcacatgctggtcatcctgaagcgcgaccgcgaggtgctgaaaatgtac
caggagcgcttcaaatatatcatggtcgatgagtatcaggacaccaacagcgtccagtat
ctctggctccgcctgctcgcgcaggaacacaagaatatctgctgtgtcggcgatgacgac
caatcgatctatagctggcgcggcgcgcaggtcgagaatatcctgaagttcgagaaggac
tttcccggcgcggcgatcattcggctggaacagaattaccgctccaccccgcatatcctg
gccgccgcgagtggcgtgatcgccaacaacagcggccgcctcggcaagacattatggacc
gacgagcccgacggcgagaaggtcaaggtgatcggcgtatgggacggcccggaagaggca
cgccgcgtcggcgaggaaatcgaaagctgccagcgcgcgggcaagagcatcgacgacatc
gccatcctggtccgcgcgcagcaccagacgcgcgagttcgaggaccgcttcatctcgatc
ggcatgccgtaccgcatcgtcggcggtttccgcttctacgaacgcgccgaaatccgcgat
gcgctcgcctatctgcgcgtcgtcgcgcagccggccgacgaccttgccttcgaacgcatc
gtcaacgtgcccaagcgcgggcttggcgacaaggcggtgcagaaagtgcaccagctcgcc
cgcgcggaaggcattccgctcgccaccgccgccgcgcgcatcctcgacaccgatgagctg
accccgcaggcacgccgcgcgttcggcaatctggtcggcgacatggcgcgctggcgtgcg
ctcgccaatgatacgccgcaccccgaactggcgcgccagatcctcgacgaaagcggctat
accgcgatgtggcaggtggaaaaatccgccgaggccgccggccggctggagaacctcacc
gaactggtccgcgcgatggaggaatatgagagcctgaccgcgttcctcgaacatgtcagc
ctggtgatggataacgaggcggcggcggaggaggccaaggtgacgatcatgacgatccac
gccgccaagggcctggagtatgacacggtcttcctggtcggctgggaagaagggctgttc
ccctcgcagcgctcactcgacgaaggcggcctggccagcttggaggaggaacgccgcctc
gcctatgtcgcgatcacccgcgcccggcgccgcgcggtcatcatccacgccgccaatcgc
cgcatctatggccaatggaccagcagcatcccgtcgcgcttcgtcggcgaattgcccgac
gcacataccgagagcgagagcagcatgtccggcggcgaaagcctgtggcgcgccaactgg
tccgaacgcgccgacccctttgcggatgtggcgcgcggtacgggaagaggcccgggctgg
cagcgcgcggcgggcgtgaacccgggcggtagctttaccagccgtaccttcactcgcgag
ccttcgcgggtggtggaaagccgggccagcgcggtgagcatcgggaataaggggcggtcc
gacgtcgcggtcgggatgagggtgttccaccagaagttcggttatggcgagattgccgag
atcgaggggaataagctggagatcgatttcgaggctgcggggcggaagcgggttatggat
agttttgttactgtcgggtga
DBGET
integrated database retrieval system
