Sphingomonas alpina: H3Z74_10550
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Entry
H3Z74_10550 CDS
T07078
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
spap
Sphingomonas alpina
Brite
KEGG Orthology (KO) [BR:
spap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spap03009
]
H3Z74_10550 (rimO)
Enzymes [BR:
spap01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
H3Z74_10550 (rimO)
Ribosome biogenesis [BR:
spap03009
]
Prokaryotic type
ribosomal protein modification factors
H3Z74_10550 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QNQ11528
UniProt:
A0A7H0LPC5
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All DBs
Position
2289297..2290622
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AA seq
441 aa
AA seq
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MATILPTPPKIGMVSLGCPKNLVDSERILTKLRSDGYAMSPDYAGADVVLVNTCGFLDSA
KEESLEAIGEAIAENGRVIVTGCMGKEAETIRARFPNVLAVTGAHQYEEVVGAVHEAAPM
PPSAFLNLVPESGLKLTPRHYSYLKISEGCNHRCSFCIIPSLRGDLVSRRPDAILREAEK
LIEAGTKELLVISQDTSAYGVDIRHQPRQWKGEEVRAHMTDLSRELGKLGAWVRLHYVYP
YPHVDQVIPLMAEGLILPYLDIPFQHASRNVLKLMKRPANEAKVLERVKNWRTIAPDIAI
RSTFVVGFPGETEDDFKYLMDWLEEAQLDRVGAFRFEPVEGAAANALPDQVPEEIKEERY
ARLMELTARISADKLQAKIGRTLDVIIDAVDEDGATGRSKADAPEIDGEVHLRDAGHLKQ
GDIVSVEIEDADEHDLFGVPA
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaatcctccccaccccgccgaaaatcggcatggtttcgctcggctgtcccaag
aatctggtcgacagcgaacgcatcctgaccaagctccgttccgatggctatgccatgtcg
cccgactatgccggcgccgacgttgtgctggtcaatacctgcggtttcctcgattccgcc
aaggaagagagcctggaagccatcggtgaggcgattgccgagaatggccgcgtgatcgtc
accggctgcatgggcaaggaagccgagacgatccgtgcgcgcttccccaacgttctcgcc
gtcaccggcgcgcatcaatatgaggaagtggtcggcgcagtccatgaggcggcgccgatg
ccgcccagcgcctttctcaacctggtgccggaaagcggcctgaagctcaccccgcgccat
tacagctatctgaagatttccgaaggctgcaaccaccgctgctctttttgcattatcccg
tcattgcgcggcgacctggtcagccggcgccccgacgcgatcctgcgcgaagccgaaaag
ctgatcgaggcgggcaccaaggaactgctggtgatcagccaggacacctcggcttacggc
gtcgatatccgccatcagccgcgccagtggaaaggtgaggaagtccgcgcccatatgacc
gacctgtcgcgcgagctgggcaagctcggtgcgtgggtgcggctgcattatgtctatcct
tatccgcatgtcgaccaggtcatcccgctgatggccgagggactgatcctcccctatctc
gacatcccgttccagcatgccagccgcaatgtgctcaagctgatgaagcgcccggcaaac
gaggcgaaggtgctcgagcgagtcaagaactggcgcaccatcgcccccgacatcgcgatc
cgctcgacctttgtggtcggcttccccggcgagaccgaggatgattttaaatatctgatg
gactggctcgaggaagcgcagctcgaccgtgtcggcgctttccgcttcgagcctgtagag
ggcgccgcggccaatgccctgcccgaccaggtacccgaagagatcaaggaagagcgctac
gcccgattgatggagctgaccgcgcggatttctgccgacaagctgcaggcgaagatcggc
cgaacgcttgatgtgatcatcgatgcagtggacgaggacggcgcgaccggccgctcgaag
gccgatgcgccggaaatcgacggcgaagtgcatctgcgcgatgcagggcatctgaaacag
ggcgatatcgtcagcgtcgagatcgaggatgccgacgaacatgatctgttcggggtgccg
gcctaa
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