Sphingomonas alpina: H3Z74_15600
Help
Entry
H3Z74_15600 CDS
T07078
Name
(GenBank) rhizobiocin
Organism
spap
Sphingomonas alpina
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
Motif
Other DBs
NCBI-ProteinID:
QNQ08184
UniProt:
A0A7H0LET1
LinkDB
All DBs
Position
3339196..3344052
Genome browser
AA seq
1618 aa
AA seq
DB search
MVDYVGGAGNDVFVGTGDIDTAHGNGGNDTLSGNGANDQLYGENGNDRLDGGLGIDRMEG
GAGDDVYFVDDIGDEVIEASGGGNDTIVSSISFSIQNRAIENLTVSAAPGLTYNEGIGNE
LNNVLTGVLDGNPTGVSLNGEGGNDLIYGSAGNDFLTGGDGDDTIYGGDGNGLDQIAGGE
GNDRMYGGAGYDYYTVNDAGDMIFEAVGEGTDLAFIYTPSYVLTAGQEVEFIYAYALTPD
ETLNISGNEFGQTIYGSGNVTILNGLGGDDVLTGYTGTDTLNGGDGTDTLNGGDGNDILD
GGTGGDTMTGGLGDDRYIVDNSLDRVIELDGEGTDSVESSVSFSLGSLTAVENLTLTGIG
AINGTGNALSNILIGNSAANTLDGGLGDDQLDGGEGNDIVNGEAGNDAINGGYGDDIVSG
GAGDDELTDLFGSNILNGETGNDRLFGGFDEDRLYGGDGADLIQGQDGNDILDGGAGIDV
MVGGAGNDRYIVDNIDDRVEEFDYSQEGNGIDLVESSVTFSLSPVQTEGVENLILTGGAA
INGTGNALNNNMRGNVAANTLYGGDGNDVLDGGAGGDRLYGGAGDDRYILDNSLDRVIEL
DGEGTDLVESAVSFSFSGLTALENLTLTGSAAINGTGNALANILIGNSAANILDGGAGAD
TMQGGLGNDTYYVDVAGDAVREGVGGGNDTVLVARSYALAAGQEIETLATANDAGTGFIN
LTGNEFANILRGNAGGNRLDGGLGADQMSGGLGNDIYVVDTLEDRVIELSGGGTDTIESS
VIFSLRNAIEVENLTLTGAAAIHGEGNNLANILTGNAAANNLFGLVGNDTLYGGDGEDLL
DGGLGADRLYGGAGNDRYIVDDSGDQVFEVKDGGTDIVESSVTFSLAGAAVENLTLTGTA
AINGTGNDLANALRGNTGNNQLDGGLGADTLYGDAGNDMLLGGGGNDILTGGAGIDEMSG
GGGDDHFHVDNAGDMVFETAGQGLDYVYTTLSYALAAGQEIEYFGITAVSGGADQPINLT
GNDYGQAILGNAASNILSGLGGNDGLQGFDGSDTLYGGDGNDVLDGGLGGDRLYGGAGDD
RYSLDNSLDRVIELDGEGTDTVESSVSFSFSGLTGLENLTLTGSAAINGTGNALNNVLIG
NAAANILDGGAGIDTMQGGLGNDTYYVDVAGDAVLEGVGGGNDTVLVARSYALAAGQEIE
TLATANDAGTGFINLTGNEFANTLRGNAGVNRLDGGLGADQMVGGLGNDIYVVDNIGDQI
VELSGGGTDTIESSVSFSLGNAPEVENLTLTGTAPTSAQGNGLANILTGNAGANLLQGGD
GNDILDGGTGADWMHGGQGNDQYYIDDINDYILEQVNEGLDSVYSSITYSLLLADGAVED
LTLIGSAAINGTGNVLNNRITGNAAVNILDGGQGNDTLDGGAGADLLYGGGSDDRYIVDN
SMDRVIEFANEGTDLVESSVSFSFSNLAELENLTLTGSAAINGTGNASGNFLTGNSAANI
LDGGLGSDTLTGLGGADTFVFGTALGASNVDTITDFVHGTDRIELDQSVFAGLGLGTLSA
SAFSNGPATNADQHILYDAATGTLSYDADGSGAGAAIIFATLANHPATITSADFLVVP
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atggtggattatgttggcggcgctggtaacgacgtgtttgtcggtaccggagatatcgat
actgcgcatggcaatggcggtaacgacacgctgtccggcaacggcgccaacgatcagctg
tacggcgagaacggcaacgaccggctcgacggcgggcttggcatcgaccgcatggagggc
ggtgcgggcgatgacgtctatttcgtcgatgacatcggcgatgaggtgatcgaagcgtcc
ggcgggggcaatgacaccatcgtgagttcgatatccttctcgattcaaaaccgcgcaatc
gagaacctgaccgtgagtgcggctcccggcctgacctataatgaaggcatcggaaatgag
ctgaacaatgtgctgaccggggttctggacggcaacccgacaggcgtcagcctgaacgga
gaaggcggcaacgacctgatctacggcagcgcgggcaatgattttctcaccggcggcgac
ggtgacgacacgatctatggcggcgatggcaacggattggatcaaattgccggcggtgaa
ggcaatgaccggatgtatggtggcgccggttacgattattatacagtcaatgatgccggc
gacatgattttcgaggccgtgggcgaaggcactgatctggccttcatctatactccatct
tatgtcttgaccgcgggacaggaagtcgaattcatatatgcctatgccctgactccagac
gaaacgctcaacatttccggaaacgaatttggccagacgatatatgggtctggcaatgtc
actatattgaacgggcttggcggcgatgatgtcctaaccggctataccggtacggatacg
ctgaatggcggcgatggcaccgacacactcaatggtggcgacggcaacgacatactcgac
ggcggtaccggcggcgacacgatgaccggcggtctgggcgatgaccgctatatcgtcgac
aatagcctggaccgggtgatcgaactcgatggcgaaggtacggatagcgtcgaaagctcg
gtgagcttctcgctcggcagcctgaccgcggtggagaatctgacgctgaccggcatcggt
gcgatcaacggcaccggcaatgcgctgagcaatatcctgatcggcaattcggcggcgaac
acccttgatggcggcctcggcgatgatcaacttgatggcggcgagggcaacgacattgtg
aacggcgaggcgggcaatgacgcgattaatggtggttacggcgacgatatagtgagtggc
ggtgcgggagatgacgagcttactgatcttttcggcagcaacatattgaatggcgagacg
ggcaacgatcggctgtttggcggctttgatgaagatcgtctctacggtggcgacggcgcc
gatctgatacaggggcaagacggcaatgatatattggacggcggcgccggcattgatgtg
atggtcggtggcgcgggcaatgatcgttatatcgtcgataacattgatgatcgggtcgaa
gagttcgattatagccaggaaggcaacggtatagatctcgtcgagagttcagtcacattc
tcgctgtcgcctgttcaaactgaaggagtcgagaatcttattttgaccggcggtgcggcg
atcaacggtaccggcaacgcgctgaacaacaatatgcggggcaacgtcgcggcaaacacg
ctgtacggcggcgacggcaatgacgtgcttgatggcggcgctggtggcgaccggctttac
ggcggcgcgggcgatgatcgctatatcctcgacaacagcctcgatcgcgtgatcgagctc
gacggcgaaggcacggatctggtcgaaagcgctgtgagcttttcattcagcggcctgacc
gcgctggagaatctgacgctgacagggagcgcggcgatcaacggcaccggcaatgcgctc
gccaatatcctgatcggcaattcggccgcgaacatccttgacggcggtgccggcgcggac
acgatgcagggcggcttgggcaacgacacctattatgtcgatgtcgccggggatgccgtc
cgggagggcgttggcggcggcaacgacaccgtgctcgtcgcgcgaagctatgcgctggcg
gccggacaggaaatcgagacgctagcgacggcaaacgatgccgggaccggcttcatcaac
ctgacgggcaacgagttcgccaatatcctgcgcggcaatgccggcggcaaccggcttgat
ggcggcctgggcgcggaccagatgtccggtggactgggcaacgacatttatgtggtcgac
acgctcgaagaccgggtgatcgagctgagcggcggcggtacggatacgattgaaagttca
gtcattttttccctcaggaatgcgatagaggtggaaaatctcacgctgaccggtgctgcc
gcgatccacggcgagggaaataatctggccaacatcctgaccggcaatgcggcggcgaac
aatctgttcggcctggtcgggaacgacaccctgtacggcggtgatggtgaggatctgctc
gatggtggccttggtgccgaccgtctttatggcggcgccggcaatgaccgctacatcgtc
gacgatagcggcgaccaggtgttcgaggtcaaggatggcggtacggatatcgtcgagagt
tcggtgacgttttcgctggcgggcgcggcggtggaaaatctcacactgaccggcacggca
gcgatcaacggcaccggcaacgatctcgccaatgcactgcgcggcaataccggcaacaac
cagctcgacggcggactgggggccgacacgctgtatggtgacgcgggcaatgacatgctg
ctgggcggcgggggcaacgatatcctgaccggcggtgccggcatcgacgagatgtccggc
ggcggtggggatgatcatttccatgtcgacaatgccggcgatatggttttcgaaaccgcc
ggccagggtctggattacgtctatacgaccctatcctacgcgttggcggccggccaggag
atcgaatatttcggcatcactgccgtgtccggcggtgccgatcagccgatcaacctgacc
ggcaatgattacggacaagccattctgggcaatgccgcaagcaacatattgagtggcctt
ggcggcaatgacgggctgcagggctttgacggcagcgacacgctgtacggcggtgacggc
aatgatgtgctcgatggcggcctgggcggcgatcggctgtacggtggcgcaggcgacgac
cgttatagtctcgacaacagcctggaccgggtgatcgagctcgacggcgaaggcacggat
accgtcgaaagctcggtaagcttttcgttcagtggcctgaccgggcttgagaatctgacg
ctgaccggcagtgcggcgatcaacggcacgggcaatgcgctgaacaatgtgctgatcggc
aatgcggcggcgaacatcctggatggcggcgccggcattgacacgatgcagggaggcttg
ggcaacgacacctattatgtcgatgtcgccggggatgccgtcctggagggcgttggcggc
ggcaacgacaccgtactcgtcgcgcgaagctatgcgctggcggcagggcaggagatcgag
acgctggcgacggccaatgatgccgggaccggcttcatcaacctgaccggcaatgaattc
gccaacacgctgcgcggcaatgccggcgtcaaccgccttgatggcggcctgggcgcggac
cagatggtcggcggcctgggcaacgacatttatgtcgtcgacaatatcggggaccagatc
gtcgagctgagcggcggcggcaccgacacgatcgaaagctcggtcagcttttcactcggg
aatgcgcccgaggtggaaaatctcacgctgaccggcacggccccgactagcgcgcagggc
aacggactcgccaatatcctgacgggcaacgcgggcgcgaacctccttcagggcggcgac
ggaaacgatatactcgacggcggcactggtgccgattggatgcatggcggccagggcaat
gatcaatattatatcgatgacattaacgactatattctggaacaggtcaacgaaggcttg
gacagcgtctacagttccataacctactcgctattgcttgcggacggggcggtcgaggac
ctcacgctgatcggctcggccgcgatcaatggcaccggaaacgtcttgaacaacagaata
actggcaacgccgcagtaaacatattggacggcggccagggcaacgacactctcgacggc
ggcgccggcgccgacctgctgtacggcgggggttccgatgaccgctatatcgtcgacaac
agcatggaccgtgtcattgagttcgccaacgaaggtacagacctggtcgaaagttcggtg
agcttctcattcagcaacctggccgagctggagaatctgacgttgaccggcagcgcggcg
atcaacgggacgggcaatgcgtcgggcaatttcctgaccggcaattccgccgcaaacatc
ctcgatggcgggctgggtagcgatacgctgaccggcctgggcggtgctgatacgttcgtg
ttcggcacggcattgggcgcgagcaatgtcgatacgatcacggacttcgtccatggcacc
gaccggatcgaactcgaccagtcggtctttgcggggcttgggctgggcacgctcagcgcc
agcgcgttcagcaacggacctgccaccaacgcggatcaacatatcctgtacgacgcggcg
accggcaccctgtcctatgatgccgatgggtcgggtgcgggcgcggcgatcatcttcgcc
accctcgccaatcatcccgccaccatcaccagcgccgacttccttgtcgtaccgtga
DBGET
integrated database retrieval system
