Sphingomonas alpina: H3Z74_21090
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Entry
H3Z74_21090 CDS
T07078
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
spap
Sphingomonas alpina
Pathway
spap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H3Z74_21090 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spap03019
]
H3Z74_21090 (recQ)
03400 DNA repair and recombination proteins [BR:
spap03400
]
H3Z74_21090 (recQ)
Enzymes [BR:
spap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H3Z74_21090 (recQ)
Messenger RNA biogenesis [BR:
spap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H3Z74_21090 (recQ)
DNA repair and recombination proteins [BR:
spap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H3Z74_21090 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
HRDC
RQC
Helicase_C
RecQ_Zn_bind
ResIII
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
QNQ09143
UniProt:
A0A7H0LHJ0
LinkDB
All DBs
Position
complement(4525246..4527018)
Genome browser
AA seq
590 aa
AA seq
DB search
MSTDPLPILQSTFGFPEFRGVQRQVVDRVLAAENTLAVMPTGAGKSLCYQLPAVALDGTC
VVVSPLIALMHDQLRAASAIGIRAATLTSVDTDQMETIARFRRGELDLLYVAPERASGES
FRNLLGQAPLALFAIDEAHCVSEWGHDFRPDYRLLRPLLDHFPHVPRLALTATADAVTRA
DILDQLGIPREGMIVAGFDRPNIRYMISPKDNTTRQIADLIAEQPGPGIVYAQTRAATEK
LAEALGRTGRPTRAYHAGLDPQVRARNQADFVASEDMVIVATVAFGMGIDKPDVRFVAHA
GMPKSIESYYQETGRAGRDGDPAIAHLFWGAEDFAKARLRISEVEPHRQAGERTRLTALS
ALVETAGCRRRILLKHFGDESPENCGNCDNCLSPPSAVDATEVARKFLSAVFRTGQSFGV
GYIESILTGQSSERSLMNGHEALGVFGIASSSEEAALIKPVARALLLRDALRANDFGGLE
FGPEAKAILKGEAEVALIVQPKRERRRRGGAGAVANPTGDPLFEALRAKRRALAAEASVP
PYVIFHDSVLREMATTRPANAAALGRISGVGARKLEAYGDAFLQVIREAA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccgatcccctgcccatcctgcaatccactttcggctttcccgagtttcgcggg
gtgcagcggcaagtggtcgaccgcgtgctcgcagccgagaatacgcttgcggtgatgccg
accggggcaggcaagtcgctctgctatcagctgcccgcggtggcgctggacggcacctgc
gtggtcgtctcgccgctgatcgcgctgatgcacgatcagctgcgcgcggcgtccgcgatt
ggcattcgcgcggcgacactgacctcagtcgataccgaccagatggagacgatcgcgcga
ttccggcgcggcgagctcgacctgctctatgtcgcgccggagcgtgcatcgggcgaaagc
ttccgcaatctgctgggccaggcaccgcttgcgctgttcgcgatcgacgaagcgcattgc
gtgtcggaatgggggcatgatttccgtcccgattaccgtttgctgcgcccgctgctcgac
catttcccccatgtcccccgcctcgcgctgaccgcgaccgccgatgccgtcacgcgcgca
gacattctcgatcagctcggtattccgcgcgaggggatgatcgtcgctggcttcgaccgg
cccaatatccgctacatgatcagccccaaggacaataccacgcggcagatcgccgatctg
atcgccgagcagccggggccgggcatcgtctatgcccagacgcgtgccgcgaccgagaaa
ctggccgaggcgctgggccgtaccgggcggccgacgcgcgcctatcatgccgggctcgat
ccgcaggtgcgcgcgcgcaaccaggccgatttcgtcgccagcgaagatatggtgatcgtc
gccacggtcgcgttcggcatgggcatcgacaagccggatgtccgcttcgtcgcacatgcg
ggcatgcccaaatcgatcgaatcctattaccaggaaaccggccgcgccgggcgcgacggc
gacccggcgatcgcgcatctgttctggggcgcggaggatttcgccaaggcgcggctgcgc
atttcggaagtcgagccgcatcgccaggcgggcgagcgcacccggctgaccgcgctgagt
gcgctggtcgagacggcggggtgccggcggcgtatcctgctcaagcatttcggcgacgaa
tcgccggagaattgcggcaattgcgataattgcctgagcccgcccagcgccgtcgatgcc
accgaggtagcacgcaaattcctctccgcggtgttccgcaccgggcagagcttcggcgtc
ggctatatcgagagcatcctgaccggccagtcgagcgaacgcagcctgatgaacgggcat
gaagcgcttggcgtgttcggtatcgcttcctcatccgaagaagcggcgctgatcaagccg
gtggcgcgcgcgctgctgctgcgcgatgcactgcgcgccaatgatttcggcgggctggaa
ttcgggcccgaagccaaggcgatcctgaagggtgaggccgaagtggcgctgatcgtccag
ccaaagcgcgaacgccgccgtcgtggcggggccggcgcggtggccaatccaaccggcgac
ccgctgttcgaagcgctgcgcgccaagcgccgcgcgctggcggcggaagcgagcgtgccg
ccctatgtcatcttccatgattcggtgctgcgcgagatggcgacgacgcgccccgccaat
gccgcggcgctgggacggatttccggtgtgggggcacgcaagctggaggcgtatggcgat
gcctttctgcaagtgattcgggaggcggcatga
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