KEGG   Sphingomonas alpina: H3Z74_21500
Entry
H3Z74_21500       CDS       T07078                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
spap  Sphingomonas alpina
Brite
KEGG Orthology (KO) [BR:spap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:spap03016]
    H3Z74_21500
Enzymes [BR:spap01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     H3Z74_21500
Transfer RNA biogenesis [BR:spap03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    H3Z74_21500
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2 bpX6
Other DBs
NCBI-ProteinID: QNQ09216
UniProt: A0A7H0LHR3
LinkDB
Position
complement(4602407..4603027)
AA seq 206 aa
MTVYFHEEDIPAGLFAPGADIAVDTETMGLITPRDRLCVVQLSDGGSDEHLVRFAPGSDY
AAPNLRALLADPARVKLYHFARFDLAAISHYLKVTAAPVYCTKIASRLVRTYTDRHGLKE
LVRELLGQDISKQQQSSDWGGPVLSDAQKDYAASDVRFLHAMREELNTRLVREGRMALAQ
SCFDFLPARAELDLAGWPEVDIFAHV
NT seq 621 nt   +upstreamnt  +downstreamnt
atgaccgtatatttccacgaagaagacattcccgccggcctgttcgcgcccggcgccgac
atcgccgtcgataccgagacgatgggcctgatcacgccgcgcgaccggttgtgcgtggtg
caattgtccgatggcggttccgacgaacatctcgtgcgctttgcccccggcagcgattat
gccgcgcccaatctgcgtgcgctgctcgccgatccggcacgcgtaaagctctatcatttc
gcacgcttcgatctcgccgcgatcagccattacctgaaagtgaccgcggcgccggtctat
tgcaccaagatcgcctcgcggctggtgcgcacctataccgatcggcacgggctgaaggag
ctggttcgcgaactgctcggccaggacatttcgaagcagcagcaatcgtccgactggggc
ggcccggtgctgagcgacgcgcaaaaggattatgccgcgtccgatgtgcgcttcctgcat
gcgatgcgcgaggagctgaacacccggctggtgcgcgaaggccgcatggcgcttgctcag
tcctgcttcgatttcctgccagcccgcgccgagctcgatctcgccggctggccagaggta
gatatcttcgcgcatgtttga

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