Sphingomonas alpina: H3Z74_22075
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Entry
H3Z74_22075 CDS
T07078
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
spap
Sphingomonas alpina
Pathway
spap02020
Two-component system
spap02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spap00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H3Z74_22075
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
H3Z74_22075
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
spap02022
]
H3Z74_22075
02035 Bacterial motility proteins [BR:
spap02035
]
H3Z74_22075
Two-component system [BR:
spap02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
H3Z74_22075
Bacterial motility proteins [BR:
spap02035
]
Flagellar system
Flagellar assembly proteins
Others
H3Z74_22075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
HTH_30
AAA_5
HTH_28
AAA_16
Sigma70_r4_2
HTH_23
AAA_3
AAA
AAA_19
AAA_7
Xre-like-HTH
MerR
HTH_24
AAA_2
nSTAND3
HTH_11
NACHT
Motif
Other DBs
NCBI-ProteinID:
QNQ09322
UniProt:
A0A7H0LI19
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All DBs
Position
complement(4690230..4691507)
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AA seq
425 aa
AA seq
DB search
MRSIVPSAAVLRQKYALVSSLRAQGFAVRSFEDGRPQPGDLFLVADGETPPAPARTVIVG
ENGRYVMPSRDGSPARIAFAPEDAAVGNGFVRALIAGAETPTAADPESLALYALAERVAA
ADITVLINGPTGTGKEVLARHIHLSSDRRDGPFIAINCAALPETMLEALLFGHQKGAFTG
ASSGGEGFFRAANGGTLLLDEIAEMPIQLQAKLLRALQEREVVPIGASTPEAIDVRVIAC
ANRDLQTEVAEGRFRADLYYRLSVFPLSTKPLNERRQDIPSLAATMILRHAGNRTTVPWP
DAAAIDALVRHDWPGNVRELENVIQRALLFAAGDTISPEHIVFDRAPTPLVQRAANDQPA
PSTLGNIVQMHEFQAIRETLAACGGSRIETAKRLGISERTLRYRLAKAREQGDDITRISN
QAASA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcggtcgatcgttccatcagctgcggtgctgcggcagaaatatgccttggtctcgtca
ttgcgcgcgcagggcttcgcggtccggtcgttcgaggatggccgcccgcagcccggcgat
ctattcctggttgccgacggcgaaacgccacccgccccggcgcgcaccgtgatcgtcggc
gagaatggccgttatgtcatgccgtcgcgcgacggcagcccggcccggatcgccttcgcc
cccgaagatgccgccgtcggcaatggctttgttcgcgcgctgatcgccggcgcggaaacg
ccgaccgccgcggaccccgagagcctcgccctttacgcgctcgccgaacgcgttgccgcc
gccgacatcaccgtgttgatcaacggcccgaccggcacgggcaaggaagtgctcgcacgt
catatccacctctcgtccgaccgtcgtgacggcccgttcatcgcgatcaactgcgcggca
ctgcccgagacgatgctcgaggcgttgctgttcggccatcagaagggtgccttcactggt
gcctcctcgggcggtgaaggctttttccgcgccgccaatggcggcacgctgctgctcgac
gagatcgccgagatgccgatccagctacaggccaaactgcttcgggcgctgcaagagcgc
gaagtggtgccgattggcgcctcgacacccgaggcgatcgacgtgcgcgtcatcgcctgc
gccaaccgcgacctgcaaaccgaagtcgcagaaggccgtttccgcgccgatctctattac
cgcctgtcggtcttcccgctcagcaccaagccgctcaacgagcgccgccaggacattccg
tcgctcgccgcgacgatgatcctgcgccatgccggcaaccgcactaccgtgccctggccc
gatgccgcggcgatcgatgcgctggtccgtcacgactggcccggcaatgtgcgcgagctc
gaaaacgtcatccagcgcgctctgctgttcgcggccggcgacacgatttcgcctgagcat
atcgtgttcgaccgcgcgccgaccccgctggtccagcgcgccgcgaacgatcaaccggcg
ccatcgaccttgggcaatatcgtccagatgcacgaatttcaggcgatccgcgaaacactc
gccgcgtgcggcggcagccggatcgagaccgcgaagcggctcggcatttcggagcgcacc
ctgcgctatcgtctcgccaaggcgcgcgaacagggtgacgacatcacccgcatctccaac
caggcagcatcggcatga
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