Sphingomonas alpina: H3Z74_23140
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Entry
H3Z74_23140 CDS
T07078
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
spap
Sphingomonas alpina
Brite
KEGG Orthology (KO) [BR:
spap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
H3Z74_23140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spap03400
]
H3Z74_23140
DNA repair and recombination proteins [BR:
spap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
H3Z74_23140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
CIF
Motif
Other DBs
NCBI-ProteinID:
QNQ09495
UniProt:
A0A7H0LIJ2
LinkDB
All DBs
Position
complement(4910808..4911683)
Genome browser
AA seq
291 aa
AA seq
DB search
MAARAYWQGQIRLALVSIPVEIYSATKSGAQISFKQIHEPTGKPIHYEKVVTGIGPVDTD
EIMKGFEYQKGNFVLLEQDEIDAVKLESKKTLELTQFVDADEIDVLYYEKPYFVVPADDL
AEEAFIVLREALRRTKKVGLGQLAMRGREYVVSLKPCGRGMVLETLRYADEVNKAQGYFR
DIPDTKPDADLMDLAEALIAKKSGAFHPQEFHDRYVDALKDLIERKRKSKGRKIIEDDGD
DTPKRSGSNVVDLMAALKKSMEKSGGTAAKPAAKKAPEKTAAKRPPAKKRA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggccgcacgcgcctattggcagggacagatcaggctcgctttggtctcgatcccggtc
gaaatctactctgcgaccaaatcgggcgcccagatcagtttcaagcagatccatgagccg
accggcaagccgatccattacgagaaggtcgtgaccggcatcggcccggtcgacaccgac
gagatcatgaagggcttcgaatatcagaagggcaatttcgtactgctcgaacaggacgag
attgacgcagtgaagctcgaatcgaaaaaaacgctcgaactgacccagttcgtcgacgcc
gacgaaatcgacgtgctctattatgaaaagccctatttcgtcgtgccggccgacgatctt
gccgaagaagcgttcatcgtgctgcgcgaggcactcaggcgaacgaagaaggtcgggctc
gggcagctggcgatgcgcggccgcgaatatgtcgtcagcctgaagccgtgcgggcgcggc
atggtgctggaaacattgcgctacgccgatgaggtcaacaaggcgcaaggctatttccgc
gacattcccgataccaagcccgatgccgatctgatggatctggccgaggcactgatcgcc
aagaaatcgggtgcgttccacccgcaggaattccatgaccgctatgtcgatgcactgaag
gatctgatcgagcggaagcgcaagtcgaaggggcgaaagatcatcgaggacgatggcgac
gatacgccgaagcgctcgggctccaacgtcgtcgatctgatggcggcgctcaagaaatcg
atggagaaatcgggcgggacggcggcaaagccggcggcgaagaaagcaccggaaaaaacg
gcggcaaagcgcccgccggcgaagaaacgtgcctga
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