Stenotrophomonas pavanii: STNY_R00380
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Entry
STNY_R00380 CDS
T07567
Name
(GenBank) TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
spaq
Stenotrophomonas pavanii
Pathway
spaq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
STNY_R00380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spaq02000
]
STNY_R00380
Transporters [BR:
spaq02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
STNY_R00380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
TAT_signal
DUF3906
Motif
Other DBs
NCBI-ProteinID:
BCX41891
LinkDB
All DBs
Position
44086..45087
Genome browser
AA seq
333 aa
AA seq
DB search
MITRRNFLAGGAAALATPMLAACGRGAAGDADGSTLLTATDVHVADYPTVTAVKWIGETL
QRETNGRLRLRQYHSGQLGRESEAIDMARFGAIDITRVYAGALNNAFPLTQALCLPYVFR
SVAQQRAALDGGVADAVLRGFEGRDLVGLAIYDSGARCFYNTKHPIVSPSDLHGLKLRVA
SSDIFIQLMRLLGANPTPMSLGDTFSGMETHMIDGAENNMRSFHSSRHFEAAHYWSQSDH
SYAPDVLLMSRARFERLSPDDRQLLLHTARASVAVMREQWDASEDAARRAVLAYGVKANE
VDMAAFRDAAQPLLKHYLQQPGIAALVDRIRAA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgatcacacgacgtaatttcctggccggcggcgccgctgcgctggcgacgccgatgctc
gccgcctgcgggcgtggggccgccggcgacgcggacggcagcaccctgctgaccgcgacc
gacgtgcacgtggccgactaccccaccgtcactgcggtgaagtggatcggcgagaccctg
cagcgtgagaccaacggccgcctgcggctgcggcagtaccactcgggccagctgggccgc
gagtcggaagcgatcgacatggcgcgctttggcgccatcgacatcacccgcgtgtatgcc
ggtgcactcaacaacgcatttccgctgacccaggcactgtgcctgccgtacgtcttcagg
tcggtcgcgcagcagcgcgccgcactcgatggcggcgtggccgacgcggtgctgcgtggc
tttgaaggccgcgatctggtcggcctggcgatctacgactccggtgcacgctgcttctac
aacaccaagcaccccatcgtttcgcccagcgacctgcacggcctgaaactgcgggtggcc
tcgtcggacatcttcatccagctgatgcgcctgctcggcgccaacccgacgccgatgtcg
ctgggcgacacgttctccggcatggagacccacatgatcgacggcgccgagaacaacatg
cgcagcttccattccagccgccatttcgaagccgcgcactactggtcgcagagcgaccat
tcgtatgcgccggacgtgctgctgatgtcgcgcgcccgttttgaacgcctcagcccggat
gaccgccagctgctgctgcacaccgcccgcgcatcggtggcggtgatgcgtgagcagtgg
gacgcatcggaggatgccgcgcgccgggcggtgctggcctacggggtgaaagccaacgag
gtcgacatggcggccttccgcgatgcggcccagccgctgctgaagcactacctgcagcag
cctggcatcgccgcgctggttgaccgcatccgtgccgcctga
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