Stenotrophomonas pavanii: STNY_R00480
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Entry
STNY_R00480 CDS
T07567
Name
(GenBank) Lrp/AsnC family transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
spaq
Stenotrophomonas pavanii
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spaq03000
]
STNY_R00480
03036 Chromosome and associated proteins [BR:
spaq03036
]
STNY_R00480
Transcription factors [BR:
spaq03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
STNY_R00480
Chromosome and associated proteins [BR:
spaq03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
STNY_R00480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
MarR
MarR_2
HTH_Crp_2
HTH_IclR
HTH_20
NirdL-like_HTH
HTH_1
HTH_28
LexA_DNA_bind
Rrf2
HTH_11
HTH_5
DUF8062
HVO_A0114
HVO_A0261_N
DnaD_N
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
BCX41901
UniProt:
A0A246KW02
LinkDB
All DBs
Position
54479..54964
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AA seq
161 aa
AA seq
DB search
MAGEVQFDRTDIRLLAEIQRDGRATNAELAARVNLSPSACLRRLQRLESEGVIVGYGARL
EPRQLRLGLQAFVRVQLEKHDQAAIGHFVDSVQGWDEVVACHALTGDMDYLLHVYVRDLE
HFSHFLLDRLLNAGGVADANSSFVLRTVKGFQALPLSQLES
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atggccggagaagtccagttcgatcgcacggatatacgcctgctggctgaaatccagcgg
gacgggcgcgctaccaacgccgaactggcggcgcgggtgaatctctcgccctcggcctgc
ctgcgccgcctgcagcggctcgaaagcgagggcgtgatcgtcggctatggtgcgcgcctg
gagccacggcaactgcgcctgggcctgcaggccttcgtgcgcgtgcagctggaaaagcac
gaccaggccgccatcggccacttcgtggacagcgtgcagggctgggatgaggtggtggcc
tgccatgcgttgaccggcgacatggactacctgctgcacgtctatgtgcgcgacctggag
cacttctcgcacttcctgctggaccggctgctcaacgccggtggcgtggccgatgccaat
tccagcttcgtgctgcgcacggtgaagggcttccaggcgttgccgttgtcgcagctggag
tcctga
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