Stenotrophomonas pavanii: STNY_R00890
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Entry
STNY_R00890 CDS
T07567
Name
(GenBank) DEAD/DEAH box helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
spaq
Stenotrophomonas pavanii
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
STNY_R00890
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
MZB
WHD_HRQ1
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BCX41942
LinkDB
All DBs
Position
complement(102431..104920)
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AA seq
829 aa
AA seq
DB search
MVYELAKRTADAEQKLATRDGLPARDGALLSARLQRRYQDRITGSFAIPGREGRYAPLPA
SVPPALAAALQARGIEQLYSHQAEAWEASQRGEHVAIVTPTASGKSLCYTLPVVSAAMQD
KAKALYLFPTKALAQDQVAELLELNRAGDLGVKAFTFDGDTPGDARQAIRLHGDIVVSNP
DMLHQAILPHHTKWAQFFENLRYIVIDEVHTYRGVFGSHVTNVLRRLKRICAFYGVQPQF
ILCSATIGNPQAHAEALIEAPVTAITESGAPSGPKQVLLWNPPVINPDLGLRASARSQSN
RIARIAIKSGLKTLVFAQTRLMVEVLTKYLKDIFDHDPRKPPRIRAYRGGYLPTERRETE
RAMRAGNIDGIVSTSALELGVDIGSLDVVILNGYPGSVAATWQRFGRAGRRQQPALGVMV
ASSQPLDQYVVRHPDFFAEASPEHARIAPDQPLILFDHIRCAAFELPFRVGDGFGPIDPE
VFLEALAETEVLHREGERWEWIADSYPANAVSLRAVADGNFVVVDRSDGRQQIIAEVDYS
AAALTLYEGAIHMVQSTPYQVETLDWEGRKAYVTRTHVDYYTDSIDFTRLKVLDRFDGGV
AGRGDSHHGEVHVVRRVAGYKKIRYYTHENIGYGPVNLPDQELHTTAVWWQLPQALLLRA
FASKQDALDGFLGAAYALHIVATVAVMADARDLQKSVGNGDGSWFAIADQSGRGQLRGSE
GDPGGVELLQEFVPTVYLYDNFPGGVGLSEPLWQRQAELVQRARELVQRCDCKAGCPACV
GPVLAAQEDDETSPRALALRVLDLFDAEACQYVRDVVVTTREPMEWLAP
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggtctacgaactcgccaagcgcaccgccgatgcggagcagaagctcgccacccgcgat
ggcctgccggcccgcgatggcgcactgctcagcgcgcgcctgcagcgtcgctaccaggac
cgcatcaccggcagcttcgccattcccggccgcgaaggccgctatgcgccgcttcccgcc
tcggtaccgccggcgctggccgcggcgctgcaggcacgcggcatcgagcagctctacagc
caccaggccgaggcctgggaggccagccagcgcggcgagcacgtggccatcgtcaccccc
accgccagcggcaagtcgttgtgctacaccttgccggtggtcagcgcggccatgcaggac
aaggccaaggcgctgtacctgttcccgaccaaggcgctggcccaggaccaggtggccgag
ctgctcgaactcaaccgtgccggcgacctgggcgtgaaggccttcaccttcgatggcgat
accccgggggatgcacggcaggcgatccgcctgcatggcgacatcgtggtgtccaatccg
gacatgctgcaccaggcgatcctgccgcatcacaccaagtgggcgcagttcttcgagaac
ctgcgctacatcgtcatcgacgaggtgcatacctaccgcggcgtgttcggcagccacgtc
accaacgtgctgcgccggctcaagcgcatctgcgcgttctacggcgtgcaaccgcagttc
atcctgtgctcggccaccatcggcaacccgcaggcgcatgccgaagcgttgatcgaggcg
ccggtcaccgccatcaccgaatccggcgcacccagcgggccgaagcaggtgctgctgtgg
aacccgccggtgatcaatccggacctgggcctgcgcgcttcagcgcgctcgcagagcaac
cgcatcgcgcgcatcgcgatcaagtccgggttgaagacgctggtgttcgcgcagacacgg
ctgatggtcgaagtgctgaccaagtacctgaaggacatcttcgaccacgacccgcgcaag
ccgccgcgcatccgtgcctaccgcggcggctacctgcccaccgaacgccgcgagaccgag
cgggcgatgcgcgccggcaacatcgacggcatcgtcagcacctcggcgctggagctgggg
gtggatatcggcagcctggacgtggtcatcctcaacggctaccccggcagcgtggccgcc
acctggcagcgcttcggccgtgccggccgtcgccagcagccggcgctgggggtgatggtg
gccagctcgcagccactggaccagtacgtggtgcggcatccggatttctttgccgaagcc
tcgcccgaacatgcgcgcatcgcgccggaccagccgctgatcctgttcgaccacatccgc
tgcgccgcgttcgagctgccgttccgggtcggcgatggcttcggcccgatcgacccggaa
gtgttcctggaagcgctggccgaaaccgaggtcctccaccgcgaaggcgaacgctgggaa
tggatcgccgacagctacccggccaacgcggtcagcctgcgcgcggtcgccgacggcaac
ttcgtcgtggtcgaccgcagcgatggccgccagcagatcatcgccgaggtcgattattcc
gccgccgcgctcaccctgtacgagggcgccatccacatggtgcagtccacgccctaccag
gtggaaacgctggactgggagggccgcaaggcctacgtcacccgcacccacgtggactac
tacaccgacagcatcgacttcacccggctcaaggtgctggaccgcttcgacggcggcgtg
gccggccgtggcgattcgcaccatggcgaagtgcacgtggtgcgccgcgtggccggctac
aagaagatccgctactacacccacgagaacatcggttatggcccggtgaatctgcccgac
caggaactgcacaccaccgcggtctggtggcagttgccgcaggccctgctgctgcgcgcg
ttcgccagcaagcaggatgcgctcgatggcttcctcggtgcggcgtatgcgctgcacatc
gtcgccaccgtggcggtgatggccgatgcgcgcgacctgcagaagtcggtcggcaacggc
gatggttcctggttcgccatcgccgaccagagcggccgtggccagctgcgcggcagcgaa
ggcgatcctggcggggtggagctgctgcaggagttcgtacccacggtctatctgtacgac
aacttccccggcggcgtcggcctcagcgaaccgctctggcagcgccaggccgagctggtg
cagcgcgcgcgcgaactggtccagcgctgcgactgcaaggccggctgcccggcctgtgtc
ggcccggtgctggccgcacaggaggacgatgagacctcgccgcgggcgctggcgctgcgc
gtgctggacctgttcgatgccgaagcctgccagtacgtgcgcgacgtggtggtgaccacg
cgcgagccgatggagtggctggcaccgtga
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