Stenotrophomonas pavanii: STNY_R01730
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Entry
STNY_R01730 CDS
T07567
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K24073
RNA polymerase sigma factor CnrH
Organism
spaq
Stenotrophomonas pavanii
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spaq03021
]
STNY_R01730
Transcription machinery [BR:
spaq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
STNY_R01730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
DUF134
PhyR_sigma-like
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
BCX42026
LinkDB
All DBs
Position
198358..198921
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AA seq
187 aa
AA seq
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MTIEDDNNWAVEAAAGNAEAFARLVRRHSPAIKQMVRGMGLPETDVDDVVQETFVAAWRG
LSEYDPTRSVLPWLMRIGINKVRDTQRFRRVRHFLFRAKPLDDEEGRALHSEQAGPEQVA
GSQLELAEVRRVLNTIDPSLREALVLTAFVGLSQVEAASALGISLKTIEGRVLRARAKLT
DALSRGK
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
gtgaccatcgaggacgacaacaactgggcagttgaagctgcggcaggtaatgctgaggcc
ttcgctcgcctggtccgccgtcactcgccagcaatcaagcagatggttcgaggcatgggc
ctgcccgaaaccgacgtcgatgatgtcgtgcaggagacattcgttgccgcttggcgaggc
ctgtcagagtacgatccgacgcgctcggtacttccctggctgatgcgtattggaatcaac
aaggttcgtgatacgcaacggtttcgacgcgtccgccatttcctgttccgggccaagcct
ttggatgacgaggaaggacgcgccctgcattccgagcaggccgggccagagcaggttgcc
ggctctcagcttgagctcgcagaagtaagaagggttctcaacacgatcgacccgagcctg
cgtgaagccctggttctgactgccttcgtcggcctttcccaggttgaagcagcttccgcc
ctgggtatcagtctcaaaacaatagagggtcgcgtactgagagcacgggccaagctgaca
gatgcactgagccgcgggaaataa
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