Stenotrophomonas pavanii: STNY_R05090
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Entry
STNY_R05090 CDS
T07567
Name
(GenBank) Lrp/AsnC ligand binding domain-containing protein
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
spaq
Stenotrophomonas pavanii
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spaq03000
]
STNY_R05090
03036 Chromosome and associated proteins [BR:
spaq03036
]
STNY_R05090
Transcription factors [BR:
spaq03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
STNY_R05090
Chromosome and associated proteins [BR:
spaq03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
STNY_R05090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
AsnC_trans_reg
HTH_AsnC-type
MarR
NirdL-like_HTH
GntR
HTH_11
MarR_2
LexA_DNA_bind
HTH_Crp_2
HTH_20
DDRGK
DUF7343
AAA_lid_PRS2_C
Sigma70_r4
HTH_47
Motif
Other DBs
NCBI-ProteinID:
BCX42350
UniProt:
A0A246KY09
LinkDB
All DBs
Position
complement(561072..561551)
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AA seq
159 aa
AA seq
DB search
MAPRTRELDKIDRKILRILQAEGRISFTELGERVGLSTTPCTERVRRLEREGVITGYHAH
LDPAAVKASLLVFVEISLAYKSGDIFEEFRRAALKLPNVLECHLVSGDFDYLLKARISEM
ASYRKLLGSTLLTLPHVRESKSYIVMEEVKETLSLPIPD
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atggccccccggacccgcgaactggacaagatcgaccgcaagatcctgcgcatcctgcag
gccgagggccgtatttccttcaccgaactgggtgaacgggtcggcctgtcgaccaccccg
tgcaccgagcgcgtgcgccggctcgagcgcgaaggggtgatcaccggctaccacgcgcac
ctcgacccggcggcagtgaaggccagcctgctggtgttcgtggagatcagcctggcctac
aagtccggggacatcttcgaggagttccggcgcgcggcgctgaagcttcccaacgtgctg
gagtgccacctggtgtcgggcgacttcgattacctgctgaaggcgcggatcagcgagatg
gcctcgtaccgcaagctgctgggcagcacgttgctgacgctgccgcatgtacgggaatcg
aagagctacatcgtgatggaagaagtgaaagagacgctgagcctgccgattccggattga
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