Stenotrophomonas pavanii: STNY_R06000
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Entry
STNY_R06000 CDS
T07567
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
spaq
Stenotrophomonas pavanii
Pathway
spaq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
STNY_R06000
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spaq01007
]
STNY_R06000
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spaq03016
]
STNY_R06000
Enzymes [BR:
spaq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
STNY_R06000
Amino acid related enzymes [BR:
spaq01007
]
Aminoacyl-tRNA synthetase
Class I (U)
STNY_R06000
Transfer RNA biogenesis [BR:
spaq03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
STNY_R06000
Prokaryotic type
STNY_R06000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
Motif
Other DBs
NCBI-ProteinID:
BCX42441
LinkDB
All DBs
Position
complement(662696..665524)
Genome browser
AA seq
942 aa
AA seq
DB search
MTQLASSYDPTSFETDLYEAWEKAGHFKPSGTGEPYTILLPPPNVTGTLHMGHAFQQTLM
DALVRYHRMRGYDTLWQVGTDHAGIATEMVVSRNLALEGKGETRDSLGREGFIGKVWEWK
QQSGDTIERQMRRLGTSADWSRSTFTMDPQPSAAVNEAFVRWYEQGLIYRGQRLVNWDPV
LKTAISDLEVESAEEDGFLWSIAYTLDEGLSYEHVERDADGVETLRETRDYLVVATTRPE
TLLGDTAVMVHPEDARYAHLIGKSVVLPLTGRRVPVIADEYVDRAFGTGVVKVTPAHDFN
DYEVGVRHSLPMINLFTPVAALNENAPERFRGLDRYDARKAVLAELEDLGILVETKAHKL
QVPRGDRTGQVIEPYLTDQWFVKMDELARRGLELVEDGSIAFVPPNWINTYRHWMNNIQD
WCISRQLWWGHRIPAWFDAATGTCYVGRSEEEVRAKHNLGSEVVLNQESDVLETWFSSQL
WPFSTLGWPNEQAMAERGFDRYLPSSVLITGFDIIFFWVARMIMATDNLVGKIPFKDVYF
TGLIRDGQGQKMSKSKGNVLDPLDIIDGISIDDLVAKRTGGLMQPKMVEKIEKATRREFP
DGIAAHGADALRFTIAALATHGRDIKFDMNRAEGYKNFCNKLWNASRFALMNTEGAAFTG
VPKPRTDAERWILARLAATTAEAQGHFAAYRFDLLAQCLYEFAWNAFCDWFLELSKPALN
GADAADAESTRHTLLYVLEALLRLLHPLTPFITEQLWQQLAPRLGLAETTLSLRPYPTAA
EFEGDFAQAEADVEWLKAVISAVRRVRSELNVAPSRQVPLRLQAGLAQDRVRIERFSASL
SFLLKLDSIQWLAESESAPPAAAAIVGELKLLVPLEGLVDLDAERARLDKEIKRVEGEQE
KSETKLARFTDKVPPAVVEQERVRLVDWNTQLAGLREQRAKL
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgacccaactcgcctccagctacgacccgacgtccttcgagaccgacctctacgaggcc
tgggagaaggccggccacttcaagccgtccggcacgggcgagccgtacaccatcctgctg
ccgccgccgaacgtgaccggcacgctgcacatgggccacgcgttccagcagaccctgatg
gatgcgctggtgcgctaccaccgcatgcgcggctacgacacgctgtggcaggtcggtacc
gaccacgccggcatcgccaccgaaatggtggtcagccgcaacctggcgctggaaggcaag
ggcgagacccgcgactcgctgggccgcgaaggcttcatcggcaaggtctgggagtggaag
cagcagtccggcgacaccatcgagcgccagatgcgccgcctcggcacctccgccgactgg
tcgcgcagcactttcaccatggacccgcagccgtcggcagcggtcaatgaagcgttcgtg
cgctggtacgagcagggcctgatctaccgtggccagcgcctggtcaactgggacccggtg
ctgaagaccgccatttccgacctggaggtggagagcgccgaggaagacggcttcctgtgg
tcgatcgcctacacgctcgatgaaggcctgagctacgagcacgtcgagcgcgatgccgac
ggcgtggaaaccctgcgcgagacccgcgactacctggtggtcgccaccacccgcccggaa
accctgctgggcgataccgcggtgatggtgcacccggaagacgcgcgctacgcgcacctg
atcggcaagagcgtggtgctgccgctgaccggccgccgcgtgccggtgatcgccgacgag
tacgtggaccgcgcgttcggcaccggcgtggtcaaggtcactccggcccatgatttcaat
gactatgaagtcggcgtgcgccacagcctgccgatgatcaacctgttcaccccggtggcg
gcgctgaacgagaacgcgccggaacgcttccggggcctggaccgttatgacgcgcgcaag
gccgtgctggccgaactggaagacctgggcatcctggtcgaaaccaaggcacacaagctg
caggtgccgcgcggcgaccgtaccggccaggtgatcgagccgtacctgaccgaccagtgg
ttcgtgaagatggacgagctggccaggcgtggcctggaactggtcgaggacggaagcatt
gccttcgtgccgccgaactggatcaacacctaccgccactggatgaacaacatccaggac
tggtgcatcagccgccagctgtggtggggccatcgcattccggcgtggttcgacgccgct
accggcacctgctacgtcggccgcagtgaagaggaggtgcgggcaaagcacaacctgggc
agcgaggtggtgctgaaccaggaaagcgacgtgctggagacctggttctcctcgcagctg
tggccgttctccaccctgggctggcccaacgaacaggccatggccgagcgcggcttcgac
cgctacctgccatcgtcggtgctgatcaccggctttgacatcatcttcttctgggtggcg
cgcatgatcatggccaccgacaacctggtcgggaagatcccgttcaaggacgtctacttc
accggcctgatccgcgacggccagggccagaagatgtccaagagcaagggcaacgtgctc
gacccgctggacatcatcgacggcatcagcatcgacgacctggtcgccaagcgcaccggc
ggcctgatgcagccgaagatggtggagaagatcgagaaggccacccgcagggaattcccg
gacggcattgcggcccacggtgccgatgcgctgcgcttcaccatcgccgcgctggccacc
cacggccgcgacatcaagttcgacatgaaccgcgccgagggctacaagaacttctgcaac
aagctgtggaacgccagccgcttcgcgctgatgaacaccgaaggtgctgcgttcaccggc
gttcccaagccgcgtaccgatgccgagcgctggatcctcgcgcgcctggccgccaccacc
gccgaagcgcagggccatttcgccgcctatcgtttcgacctgctggcgcagtgcctgtac
gaattcgcctggaacgcgttctgcgactggttcctggaactgagcaagccggcgctgaac
ggcgccgacgccgccgatgccgagagcacccgccacaccctgctgtacgtgctggaagcg
ctgctgcgcctgctgcacccgctgacgccgttcatcaccgaacagctgtggcagcagctg
gcgccgcgcctgggcctggccgaaaccacgctgtcgttgcgcccgtaccccactgccgct
gagttcgagggcgatttcgcccaggccgaggccgacgtggaatggctgaaggcggtgatc
agtgcggtgcgtcgcgtgcgcagcgaactgaacgtcgcgccgtccaggcaggtgccgctg
cgcctgcaggccggcctggcgcaggaccgcgtgcgcatcgaacgcttcagcgcctcgctg
tcgttcctgctgaagctggacagcatccagtggctggccgagagcgaaagcgcgccgccg
gccgcggccgcgatcgtgggcgagctgaagctgctggtaccgctggaaggcctggtcgat
cttgatgccgagcgtgcgcgcctggacaaggaaatcaagcgcgtggaaggcgaacaggaa
aagagcgagaccaagctggccaggttcaccgacaaggtgccgccggcggtggtcgagcag
gaacgcgtgcgcctggtcgactggaacacccagctggccggcctgcgcgagcagcgcgcg
aagctgtaa
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