KEGG   Stenotrophomonas pavanii: STNY_R06220
Entry
STNY_R06220       CDS       T07567                                 
Symbol
gspD
Name
(GenBank) type II secretion system secretin GspD
  KO
K02453  general secretion pathway protein D
Organism
spaq  Stenotrophomonas pavanii
Pathway
spaq03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:spaq00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    STNY_R06220 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:spaq02044]
    STNY_R06220 (gspD)
Secretion system [BR:spaq02044]
 Type II secretion system
  General secretion pathway protein
   STNY_R06220 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: BCX42463
LinkDB
Position
697815..700025
AA seq 736 aa
MNLRFLPWSFALALLVGCSTVSAPHVQRNGNLSPSAGAGAGQAADGVADAARESQGAPQA
VIRRGTGTMINREAARAPAPALHGASTGEATFNFEGESLHAVVKAILGDMLGQNYVIAPG
VQGTVTLATPKPVSPAQALNLLEMVLGWNNARMVYSGGRYNIVAADQALAGTVAPSTAPA
ASARGFEVRVVPLQFISATEMKKVLEPYARPNAIVNVDSGRNVITLGGTRAELENYLRTV
EIFDVDWLSGMSVGVFPIQSGKAEQVAADLEKVFGEESKTPSAGMFRFLPLENANAVLVI
TPQVRYLDQIQQWLDRIDTAGGSARLFSYELRYIKARDLAERLSEAFASSGNRGGSSPAS
LAPGAIPSQLGSDGDRGMDTTSSTLGSTLGGTSGSGGSGNGSLNLPQRQPGNVSVSLEVE
GDRVGVSAVEETNTLLVRSSPQAWRSIREVIEKLDVMPLQVHIEAQVAEVALTGDLKYGV
NWFFDNAVAGRALTGALAGLTLPPASGGSWNTFAGGVTGNDGVGWAFTGHNAAAVVSALD
KVTDLRLLQTPSVFVRNNAEATLNVGDKVPINTTTVNTGVGTSTYSSVQYIDTGVILKVR
PRVTRDGTVFLDIVQEVSSASDVPDSCNPTERNCNPRISTKKLSTEAAVQSGDTIMLAGL
ITDSATDGSSGIPGLSRIPVVGALFGQKTRTSRRSEVIVLLTPTIVRNNQESRNLTDEYS
KRFRAMEPLNAPRAKK
NT seq 2211 nt   +upstreamnt  +downstreamnt
atgaacctgcgttttcttccctggtcctttgccctcgcgctgctggtcggctgcagtacg
gtgtccgcgccgcacgtgcagcgcaacggcaacctgtcgcccagcgccggcgccggcgcc
ggccaggcggccgatggcgtcgccgatgccgcccgcgagagccagggcgcgccgcaggcg
gtgatccgccgtggcaccggcacgatgatcaaccgtgaggccgcgcgcgccccggcaccg
gcgctgcatggcgccagcaccggcgaggccactttcaacttcgagggcgaatcgctgcat
gcggtggtcaaggccatcctcggcgacatgctgggccagaactacgtgatcgcaccgggc
gtgcagggcacggtcaccctggccacgcccaagccggtctcgccggcgcaggcgctgaac
ctgctggagatggtgctgggctggaacaacgcgcgcatggtctacagcggcgggcgctac
aacatcgtcgccgccgaccaggccctggccggcacggtggcaccgagcaccgcgccggcc
gccagcgcgcgcggcttcgaggtccgcgtggtcccgctgcagttcatttccgccaccgag
atgaagaaggtgctggagccgtatgcgcgccccaacgccatcgtcaacgtcgacagcggg
cgcaacgtgatcaccctcggcggtacccgcgccgagctggaaaattacctgcgcaccgtc
gagatcttcgatgtcgactggctgtcgggcatgtcggtgggcgtgttcccgatccagtcg
ggcaaggccgagcaggtcgctgccgacctggagaaagtgttcggcgaggagagcaagacg
cccagcgccggcatgttccgcttcctgccgctggagaacgccaacgccgtgctggtgatc
accccgcaggtgcgctacctggaccagatccagcagtggctggaccgcatcgacaccgcc
ggcggcagtgcccgcctgttctcctacgaactgcgttacatcaaggcgcgcgacctggcc
gagcgcctcagcgaggcctttgccagcagtggcaaccggggcggttccagcccggcctcg
ctcgcgccgggggcgatcccgtcgcagctgggcagtgacggcgatcgtggcatggatacc
accagcagcaccctgggctcgacgctgggcggtaccagtggcagcggcggcagcggcaat
ggcagcctgaacctgccgcagcgccagcccggcaacgtcagcgtcagcctggaagtggaa
ggcgaccgcgtcggcgtatcggcggtggaggaaaccaacaccctgctggtgcggtccagc
ccgcaggcctggcgctcgatccgcgaggtgatcgagaagctggacgtgatgccgctgcag
gttcacatcgaggcgcaggtggccgaagtcgcgctgaccggcgacctgaagtacggcgtg
aactggttcttcgacaatgccgtggccggtcgcgcgctcaccggagccctggcgggcctg
accctgccgccggcttcaggtggttcgtggaacaccttcgccggcggcgtcaccggcaac
gacggcgtcggctgggccttcaccggccacaacgcggccgcggtggtcagtgcgctggac
aaggtgaccgacctgcgcctgctgcagacgccgtcggtgttcgtgcgcaacaacgccgag
gccacgctcaacgtgggcgacaaggtgccgatcaataccaccacggtgaacaccggcgtc
ggcaccagcacctacagctcggtgcagtacatcgacaccggcgtgatcctcaaggtgcgc
ccgcgcgtgacccgcgacggcaccgtgttcctggacatcgtgcaggaagtcagcagcgcc
tcggacgtgcccgacagctgcaaccccaccgagcgcaactgcaacccgcgcatctcgacc
aagaagctgtccaccgaagcagcggtgcagagtggcgacaccatcatgctggcgggcctg
atcaccgactcggccaccgatggcagcagcggcattccgggcctgagcaggattccggtg
gtcggtgcgctgttcgggcagaagacgcgcaccagccgtcgttcggaagtgatcgtgctg
ctgacgccgaccatcgtccgcaacaaccaggagtcgcgcaacctgaccgacgagtacagc
aagcgcttccgtgcgatggagccgctgaacgcgccgcgcgcgaagaaataa

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