Stenotrophomonas pavanii: STNY_R06400
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Entry
STNY_R06400 CDS
T07567
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
spaq
Stenotrophomonas pavanii
Pathway
spaq00260
Glycine, serine and threonine metabolism
spaq00460
Cyanoamino acid metabolism
spaq00630
Glyoxylate and dicarboxylate metabolism
spaq00670
One carbon pool by folate
spaq00680
Methane metabolism
spaq01100
Metabolic pathways
spaq01110
Biosynthesis of secondary metabolites
spaq01120
Microbial metabolism in diverse environments
spaq01200
Carbon metabolism
spaq01230
Biosynthesis of amino acids
spaq01240
Biosynthesis of cofactors
spaq04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
STNY_R06400
09102 Energy metabolism
00680 Methane metabolism
STNY_R06400
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
STNY_R06400
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
STNY_R06400
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
STNY_R06400
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
STNY_R06400
Enzymes [BR:
spaq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
STNY_R06400
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Glyco_hydro_92
Motif
Other DBs
NCBI-ProteinID:
BCX42481
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Position
724346..725599
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AA seq
417 aa
AA seq
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MFPRDVRIETYDPELAKAIAAETQRQEDHVELIASENYTSPAVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDIAEQLAIDRLKQLFGADYANVQPHSGSQANQAVYFALLQPGDTILGMS
LAHGGHLTHGAKVNASGKLFNAVQYGVNDQGLIDYDEVERLALEHKPKMVVAGFSAYSQV
IDWARFRAIADKVGAYLFVDMAHVAGLVAAGVYPSPLDHAHVVTSTTHKTLRGPRGGIII
AKGADEDLVKKLQSIVFPGIQGGPLMHVIAGKAVAFKEALEPGFKAYQQQVVKNAQAMAN
TLIARGYKIVSGGTQNHLMLVDMIGKDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTS
GLRLGTPAVTTRGYVEQDCVDLANWIADVLDAPNDDAVIARVRDAVSAQCRKYPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgcgtgacgtccgcatcgaaacctacgatcccgaactggccaaggccatcgcc
gccgaaacccagcgccaggaagaccatgtcgagctgatcgccagcgagaactacaccagc
ccggcggtgatggaagcgcagggcagccagctgaccaacaagtacgccgaaggctacccg
ggcaagcgctactacggtggctgcgaatacgtggacatcgccgagcagctggcgatcgac
cgcctgaagcagctgttcggcgccgactacgccaacgtgcagccgcacagcggctcgcag
gccaaccaggccgtgtacttcgccctgctgcagccgggcgacaccatcctcggcatgagc
ctggcccacggcggccacctcacccacggtgccaaggtcaatgcgtcgggcaagctgttc
aacgccgtgcagtacggcgtcaacgaccagggcctgatcgactacgacgaagtcgagcgc
ctggccctggaacacaagccgaagatggtcgtcgccggcttctcggcgtactcgcaggtg
atcgactgggcgcgcttccgtgccatcgccgacaaggtcggtgcctacctgttcgtcgac
atggcccatgtcgccggcctggtcgccgctggcgtctaccccagcccgctggaccacgcc
cacgtggtcacctccaccacccacaagaccctgcgcggcccgcgcggcggcatcatcatc
gccaagggtgccgacgaagacctggtcaagaagctgcagtcgatcgtgttcccgggcatc
cagggcggtccgctgatgcacgtcatcgccggcaaggccgtggccttcaaggaagcgctg
gagccgggcttcaaggcctaccagcagcaggtggtgaagaacgcccaggcgatggccaac
acgctgatcgcgcgcggctacaagatcgtttccggtggcacccagaaccacctgatgctg
gtcgacatgatcggcaaggacgtgtccggcaaggacgcggaagccgcgctgggcaaggcc
cacatcaccgtcaacaagaactcggtgccgaacgacccgcgttcgccgttcgtgacctcg
ggcctgcgcctgggcaccccggcggtgaccacccgcggctacgtcgaacaggactgtgtg
gacctggccaactggatcgccgacgtgctcgatgcgccgaacgatgacgccgtcatcgcc
cgcgtgcgcgacgccgtcagcgcgcagtgccgcaagtacccggtctacggctga
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