KEGG   Stenotrophomonas pavanii: STNY_R06450
Entry
STNY_R06450       CDS       T07567                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
spaq  Stenotrophomonas pavanii
Pathway
spaq00740  Riboflavin metabolism
spaq01100  Metabolic pathways
spaq01110  Biosynthesis of secondary metabolites
spaq01240  Biosynthesis of cofactors
spaq02024  Quorum sensing
Module
spaq_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:spaq00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    STNY_R06450 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    STNY_R06450 (ribD)
Enzymes [BR:spaq01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     STNY_R06450 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     STNY_R06450 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: BCX42486
LinkDB
Position
727841..728926
AA seq 361 aa
MTTPFSVLDHLHMANALRLAERAAYTTRPNPMVGCVIAHGERVVGQGWHQRAGGPHAEVF
ALRDAGSEARGATAYVTLEPCAHYGRTPPCALALIEAGVSRVVAAMRDPFPKVDGGGFDL
LRNAGIEVAEGLMAAQARELNKGFLSRVERNRPWLRVKLAASLDGRTAMADGSSKWITGP
AAREDVQHWRARAGAILTGADTVLADDPMLTVRLADTEVMPPLRVVLDSRLRSLECSRVR
EGGAPTLYLHAAAVSAPDAADAEFASMPSVDGRLDLGAVLALLAERGINEVHTEAGATLA
GALLRGGWVDELLLYQAPTLLGDSGRPLLAGLGIEAMDQQRRLRVVDQRQVGEDIRLLLR
P
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgaccaccccgttctccgtcctcgatcacctgcacatggccaacgcgctgcgcctggcc
gagcgcgctgcctataccacccgccccaatccgatggtcggctgcgtgatcgcccatggc
gaacgcgtggtggggcagggctggcaccagcgggccggtggcccgcatgcggaagtgttc
gcgctgcgcgatgccggcagcgaggcgcgcggtgccaccgcctacgtcaccctggagccc
tgtgcccattacgggcgcacaccgccgtgtgcactggcgctgatcgaagcgggcgtgtcg
cgcgtggttgcggcgatgcgcgatccgttccccaaggtggatggcggtggcttcgatctg
ctgcgcaacgccggcatcgaggttgccgaagggctgatggcagcgcaggcgcgcgaactc
aacaagggcttcctgtcacgcgtggagcgcaaccgcccgtggctgcgggtgaagctggcc
gccagcctggatggtcgtactgcgatggccgatggcagttccaaatggatcaccgggccg
gccgcgcgcgaagacgtgcagcactggcgggcacgcgcaggtgcgatcctgaccggcgcc
gacacggtgctcgctgatgacccgatgctgaccgtgcgcctggccgataccgaggtgatg
ccaccgctgcgggtggtgctcgattcgcgcctgcgttcgctcgaatgcagccgtgtgcgc
gagggcggggcaccgacgctgtacctgcacgctgcggcggtgagcgcaccggacgcggcc
gatgccgaattcgccagcatgcccagcgttgatgggcggttggatctgggcgcggtgctg
gcgctgctggccgagcgcggcatcaacgaagtgcacaccgaagccggtgccacgctggcc
ggtgcgctgctgcgcggcggctgggtcgatgagcttctgctttatcaggcccccacgctg
ctgggcgacagcggacgcccgctgctggctggcctcggcatcgaggcgatggatcagcag
cgtcgcctgcgcgtggtcgaccagcggcaggtgggcgaggacatccggctgctgctgcgc
ccgtga

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