Stenotrophomonas pavanii: STNY_R06640
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Entry
STNY_R06640 CDS
T07567
Symbol
rsmI
Name
(GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
spaq
Stenotrophomonas pavanii
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spaq03009
]
STNY_R06640 (rsmI)
Enzymes [BR:
spaq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
STNY_R06640 (rsmI)
Ribosome biogenesis [BR:
spaq03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
STNY_R06640 (rsmI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
DUF2267
Motif
Other DBs
NCBI-ProteinID:
BCX42505
LinkDB
All DBs
Position
750398..751216
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AA seq
272 aa
AA seq
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MSVPTLYVVATPIGNLADLSPRAQEVLRSVAAICAEDTRRSGQLLSHFGIQQPLVALHEH
NEEALAQRLVSRLQAGESLALVSDAGTPLVSDPGFRLVRAARAAGIKVSPVPGACAAIAA
LSVAGLPSDRFSFEGFLPAKASGRRDRLQALAGEVRTMVFYESSHRIAESLADMAAIFGG
ERPAVLARELTKLFETVLDGDLAGLLAKVEADDNQRKGEFVVMVQGAGDDEEAQLAHGRR
VYAKLSEHLPPSTAAKLAAELTGAPRKALYGS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcccaaccctgtacgtcgtcgccaccccgatcggcaacctggccgatctgagc
ccgcgcgcgcaggaggtgctgcgctcggtggcggccatctgtgccgaggacacccgccgc
agcggccagctgctgtcccatttcggcatccagcagccgctggtggccctgcacgagcac
aacgaggaggcgctggcgcagcggctggtctcgcgcctgcaggccggcgagtcgctggcg
ctggtcagtgacgccggtacgccgctggtcagcgatccggggttccgcctggtgcgtgcc
gcgcgcgcggcgggcatcaaggtcagcccggtgcccggcgcctgcgccgccatcgccgcg
ctgagcgtggccggcctgcccagcgaccgtttcagtttcgagggcttcctgccggccaag
gccagcggccgccgcgaccgcctgcaggcgctggccggcgaagtgcgcacgatggtgttc
tacgaatcctcgcaccgcatcgccgaatcgctggccgacatggcggcgatcttcggcggc
gagcgcccggcggtgctggcccgcgagctgaccaagctgttcgagaccgtgcttgatggc
gacctggcgggcctgctggccaaggtcgaggccgacgacaaccagcgcaagggcgaattc
gtggtgatggtgcagggcgccggcgatgacgaggaagcgcagctggcccacggccgccgc
gtctacgcgaagctgagcgagcacctgccgccgtcgaccgccgcgaagctggccgcggaa
ctgaccggtgcgccgcgcaaggcgttgtacggcagttga
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