Stenotrophomonas pavanii: STNY_R07940
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Entry
STNY_R07940 CDS
T07567
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
spaq
Stenotrophomonas pavanii
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
AC_1
Pertactin
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
BCX42634
LinkDB
All DBs
Position
complement(887684..890953)
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AA seq
1089 aa
AA seq
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MYASPTRRRRASGRARRALAPLLPTLLATALWAALPVHAADLTGPLQVSDGNTLQLGADD
VLTHAAGSFALTVTGAGSQAVIDGSRINVTGSGSAVSASNGGQVQLRNATLSIAPATGTG
FYALYANGAGSVIDARDVDIDTTRNGSGFGSVQAYNGGVIHYAGGRLSMTGTGGTLAGAS
GKGSELHLADLQMSADGGARLRADSAGLLTIRNSRITLAPGGILAGVAADGVGSRAELYD
TYLQGGWFDIDSGGSLLLENVEAHSVGGSMRLLGSTLSKTYSSAVINGGSFFTVGGYGVN
INSWGELTARDATFDVREGYSGFWLASDASRLQLTDSSVDTWTDSYGHGVEIYGGTATVQ
GGRITTHGDATYGVRVTGSTGSSASRIEATGNVIDVRGDGGGGVFIGGSTATALLDSVAI
RGDGENVFGIVHMNTARLTQADRLDIRMTGSNSGGYRSYLTAFGPYWNRATFNDSHIETA
SGAAFWLQGSNHALTVKGSEVTAGDGDGRLLRVSDTVFTDGSSVATSRIDFNADASTLRG
DVVVDSATADVHLLLGNGTLFSGALRSDSGYQVAQLSLDGSSQWNVRASSSVGALDHAGT
IAFDAPTAGDFKTVTVSGDYVGNGGQWIFNRALGDDTSLGDQLVINGNSSGTASVTVRNA
GGTGALTQEGIRLITVAGQSDAQFSLQGRAVAGAYDYFLFKGGVSTPDDGNWYLRSEYVP
PVDPPEPPVDPPQPPDPPVDPPSPPEPPVDPPLPPEPPVEPPLPPEPPIDPPRPQVERPE
PAAYLANRNAALGMFRHSLHDRAGDPAAEAGASSDAVAWMHLRSAQPDSHDRNRQVHVDG
QISSVLVGVGRRFEVGGTGELQAGAMLGHGRARNDSRSQLTGYTARGVVTGTSVGAYATW
LQDAQMRGGAYVDGWLQYGRFRNSVQGDGLQKERYDARNWSASAEAGYVLPLRQTAQRGV
YLQPQLQVVHSRYESDRLIEANGTVVEDRGGGETSTRLGLRLYSRGLSPAQGQVHPYVAV
NWWSGGNGAGLAMDGERLQRPLPRDIYEAKAGVQVDLSGGWRGWGELSRQSGGMGFRDVG
AQLGVSYTW
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcctcccctacacggcgccgccgtgcgtccgggcgcgcgcgccgcgcgcttgcc
ccgctccttcccaccctgctggcgaccgccctgtgggcggcactgccggtccacgccgcc
gatctgaccggcccactgcaggtcagcgacggcaataccctgcaactcggcgcggacgat
gtcctcacccatgccgccggcagctttgcgctgaccgtcaccggtgcgggcagccaggca
gtgatcgacggcagccgtatcaacgtgaccggcagtggaagcgccgtgtccgccagcaat
gggggacaggtgcagctgcgcaacgcgacgctgtcgatcgcgccggccaccggtacgggc
ttctatgcgctgtacgccaatggcgctggcagtgtgatcgacgcacgcgacgtcgacatc
gacaccacccgcaacggcagcggattcggcagcgtgcaggcctacaacggtggcgtgatc
cactatgccgggggccgtctttcaatgaccgggaccggtggcacgctggccggtgcgtcc
ggcaagggcagcgaactgcacctggccgatctgcagatgagcgccgacggcggtgcccgc
ctacgcgccgacagcgccggcctgctgacgatccgcaacagccgcatcaccctcgccccc
ggtggcatccttgccggcgtggcggccgacggcgtgggcagccgcgccgagctgtacgac
acctacctgcagggcggctggttcgatatcgacagcggcggcagcctgctgctggagaac
gtggaagcccattcggtgggcggcagcatgcgactgctcggcagcaccctcagcaagacc
tattccagcgcggtgatcaacggcggcagcttcttcaccgtcggcggctatggcgtgaac
atcaacagctggggcgaactgaccgcccgcgacgcgaccttcgatgtacgcgaaggatat
tccggcttctggctggccagcgatgcgtcgcgcctgcagctgaccgacagcagcgtcgac
acctggaccgacagctacggccatggcgtggagatctacggcggcaccgccacggtgcag
ggcggccggatcaccacgcacggcgatgcgacctatggtgttcgcgtgaccggctccacc
ggcagctccgccagccgcatcgaagccaccggcaacgtgatcgatgtgcgcggcgacggc
ggcggcggcgtgttcatcgggggctccaccgccaccgcgctgctcgacagcgtcgcgatc
cgcggcgacggcgagaacgtgttcggcatcgtgcacatgaacaccgcacggctgacccag
gccgatcgcctggacatccgcatgaccggcagcaacagcggcggctatcgttcgtacctg
accgcgttcggcccttactggaaccgcgccaccttcaacgacagccatatcgagaccgcc
agcggcgccgcgttctggctgcagggcagcaatcatgcgttgaccgtcaagggcagcgag
gtgaccgccggcgatggcgacggccggctgctgcgggtcagcgacacggtgttcaccgac
ggcagcagcgtggcgaccagccgcatcgacttcaacgccgacgccagcacgctgcgcggc
gacgtggtggtcgacagcgcaaccgcggacgtgcacctgctgctgggcaacggcacgctc
ttcagcggtgccctgcgcagcgattccggctaccaggtcgcgcagctgtcgctggatggc
agcagccaatggaacgtgcgtgccagttccagcgtcggcgccctcgatcacgccggcacc
atcgccttcgatgcgccgacggccggcgacttcaagaccgtcactgtcagcggcgactac
gtgggcaacggtggccagtggatcttcaaccgtgcactgggtgacgacacctcgctcggc
gatcagctggtcatcaacggcaacagcagcggcactgccagcgtgaccgtgcgcaatgcc
ggtggcacgggtgcactgacccaggagggcatccgcctgatcaccgtggctggccagtcg
gatgcacagttcagcctgcagggccgcgcggttgccggtgcctacgactacttcctgttc
aagggcggcgtgtcgaccccggatgacggcaactggtacctgcgttcggaatacgtgccg
ccggtcgatccgccggagccgccggttgatccgccgcagccacccgatcccccggtcgat
ccgccgtcgccgccggaaccgccggtcgatccgccactgccgccggaaccgccggtcgag
ccgccgctgccaccggaaccgccgatcgatccgccgcgcccgcaggtggaacgcccggaa
ccggcggcctacctggccaaccgcaacgccgcgctgggcatgttccggcacagcctgcac
gaccgcgccggtgatcccgccgccgaggccggcgcaagcagcgatgccgtggcctggatg
cacttgcgcagcgcgcagccggacagccacgaccgcaaccgccaggtgcacgtcgatggg
cagatcagcagtgtgctggtcggcgtcggacgccgcttcgaagtgggcggtaccggcgaa
ctgcaggcaggtgcgatgcttggccacggccgcgcccgcaatgacagccgctcgcagctg
accggctacaccgcacgcggcgtggtcaccggcaccagcgtgggtgcctatgccacctgg
ctgcaggatgcgcagatgcgcggtggcgcctatgtggatggctggctgcagtacggccgc
ttccgcaacagcgtgcagggcgatggcctgcagaaggagcgctatgacgcgcgcaactgg
agcgcgtcggccgaggccggctacgtgctgccgctgcgccagaccgcgcagcgtggcgtc
tacctgcaaccgcagctgcaggtggtgcacagccgctacgagagcgaccggctgatcgaa
gccaacggcacggtggtcgaagaccgtggcggtggcgagaccagcacgcgcctcggcctg
cgtctttacagccgcgggttgagcccggcgcagggccaggtgcacccgtacgtggcggtg
aactggtggtccggcggcaatggcgcaggcctggcgatggacggcgagcgcctgcagcgg
ccgttgccgcgcgacatctacgaagccaaggccggtgtacaggtggatctgtccggtggc
tggcgcggctggggtgaattgagccggcagagcggtggcatgggcttccgcgatgtcggt
gcccagctgggcgtgtcgtacacctggtga
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