Stenotrophomonas pavanii: STNY_R09820
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Entry
STNY_R09820 CDS
T07567
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
spaq
Stenotrophomonas pavanii
Pathway
spaq03030
DNA replication
spaq03430
Mismatch repair
spaq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STNY_R09820
03430 Mismatch repair
STNY_R09820
03440 Homologous recombination
STNY_R09820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spaq03032
]
STNY_R09820
03400 DNA repair and recombination proteins [BR:
spaq03400
]
STNY_R09820
Enzymes [BR:
spaq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STNY_R09820
DNA replication proteins [BR:
spaq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
STNY_R09820
DNA repair and recombination proteins [BR:
spaq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
STNY_R09820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
DNA_pol3_tau_5
RuvB_N
AAA_16
AAA_22
AAA_14
AAA_5
AAA_18
PIF1
AAA_7
AAA_19
AAA_2
Mg_chelatase
nSTAND3
TsaE
AAA_24
Se-cys_synth_N
Glyco_tranf_2_5
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BCX42803
LinkDB
All DBs
Position
1077549..1079558
Genome browser
AA seq
669 aa
AA seq
DB search
MSYLVLARKWRPKRFAELVGQEHVVRALSNALDSGRVHHAFLFTGTRGVGKTTIARIFAK
SLNCEQGTSADPCGQCAACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYMPSRGKY
KVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDE
DQIQGQMTRILAAEAIEADGSAIVQLAKAADGSLRDGLSLLDQAIAYAGGALREDVVRTM
LGTVDRTQVAAMLDALAAGDGPRLLQVVAALAEFSPDWSGVLEALAEGLHRIQVQQLVPG
AAVAEGLDVAAFAERLRPEVVQLWYQMALNGRRDLPLAPSPRAGFEMAVLRMLAFRPAAA
VPPVPKAIDGAAGGTAGGNAAGGGGGAGSHEATPAAAAASASPAVAAQVAAPVQAVPREP
DPEPEPAPQPEPDPTPEPEPVPVEEPESPPPVKAEAASDDLPPWATQDAEARDEALAAEM
AGPDAAMVAPWHEPPAPAAVAGEPARPERPFRAEGIAIAPVEPAPVRDVAPPDGVSELAT
AEDWLDLVATSGLSGPSRQLAANAAFISCQHGTLKLGLSPGFEYLRSERALAALGEMLQK
ALGQAPKIVVETVETEHVPAETLHQRADRQRGERQQVAEAVFMDDPEVQVLIQQHGARVV
SDSIRSFDE
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatctcgtccttgcccgcaagtggcgtccgaagcgttttgccgagctggtgggc
caggaacacgtggtccgtgcgctcagcaatgcgctggacagcggccgggtccaccacgcg
ttcctgttcaccggcacccgcggcgtgggcaagaccaccatcgcgcgcatcttcgccaag
tcgctgaactgcgagcagggcaccagcgccgacccctgcggccagtgtgcagcctgcctg
gacatcgacgccggccgctacatcgacctgctggaaatcgacgccgcgtccaacaccggc
gtggacgacgtgcgcgaggtgatcgagaacgcgcagtacatgccctcgcgcggcaagtac
aaggtctacctgatcgacgaagtgcacatgctgtccaaggcggcgttcaacgcgctgctg
aagacgctggaagagccaccggagcacgtcaagttcctgctggccaccaccgatccgcag
aagctgccggtcaccgtgctcagccgctgcctgcagttcaacctcaagcgcctggatgaa
gaccagatccagggccagatgacccgcatcctggcggccgaagcgatcgaggccgacggc
agtgccatcgtgcagctggccaaggccgctgacggcagcctgcgcgatggcctgtcgctg
ctggaccaggcgatcgcctatgccggcggcgcgctgcgcgaggacgtggtgcgcaccatg
ctgggcaccgtggaccgcacccaggtggcggcgatgctggatgcgctggccgccggcgat
ggcccgcggctgctgcaggtggtcgcggcgctggccgagttctcgccggactggagtggc
gtgctggaagcgctggccgaagggctgcaccgcatccaggtgcagcagctggtgccgggc
gccgctgttgcggaaggcctggatgtggcggcattcgccgagcgcctgcgcccggaagtg
gtgcagctctggtaccagatggccctgaacggccgtcgcgacctgccgctggcaccgagc
ccgcgcgcgggcttcgagatggcggtgctgcgcatgctggcgttccgtccggccgcagcg
gtaccgccggtgccgaaggcgatcgacggtgcggcgggcggcacggcaggtggcaacgct
gccggtggcggcggcggtgccggtagccacgaagcgacgccggccgctgccgctgcttcg
gccagcccggccgtggcggcgcaggtggccgctccggtacaggccgttccgcgcgaacct
gatcccgaaccggagccggccccgcagccggagccggatccgacgcctgagcccgagccg
gttccggtggaggaacccgagtcgccgccgccagtgaaggcggaggcggcaagcgacgac
ctgccaccgtgggccacccaggacgcggaggcgcgtgatgaggcgctggccgcagagatg
gcgggcccggacgccgccatggtcgcgccctggcatgagcctccggctcccgccgcagtc
gctggcgagcctgcgcggccggagcgtccgttccgcgccgaaggcattgccattgcgccg
gtcgaaccggccccggtgcgtgatgtcgcgccgccggacggtgtcagcgagctggccact
gccgaagactggctggacctggtggccaccagtggcctcagcggcccctcgcggcagctg
gctgccaacgccgcgttcatcagctgccagcacgggaccttgaaactgggcctttcgccc
ggatttgaatacctgcgctcggagcgcgcgctggctgccctcggcgagatgctgcagaag
gccctcggccaggcgccgaagatcgtggtcgagaccgtggaaaccgaacacgttccggcc
gagaccctgcatcagcgggccgaccgccagcgtggcgagcggcagcaggtggcagaggcc
gttttcatggacgacccggaagtgcaggtgctgatccaacagcacggcgcgcgggttgtt
tccgattccatccgttcttttgacgagtaa
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